Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g02750.1 |
Family | CBM43 |
Protein Properties | Length: 382 Molecular Weight: 37375.4 Isoelectric Point: 4.6286 |
Chromosome | Chromosome/Scaffold: 1 Start: 1849454 End: 1851695 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 190 | 271 | 5e-35 |
WCVAKAGVMEAALQSGIDYACGMGGADCTALQPMGSCYNPNTLQAHASYAFNAYFQRNPSAASCDFGGAGMLVSNNPSSGSC |
Full Sequence |
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Protein Sequence Length: 382 Download |
MAAPAFAIFF CTLIVLSSCG SSEARKTPPQ PSSALVAAEE EASSSSSPRR RELARTTARD 60 VFAPVTNPVT VPATNPAGGG NGAVVTVPST SPGGFTGSAN PNLPPLYPDP TPAGSTTPFT 120 TNPVTAPVTN PATTPAYTGS APTVTNPATT YPGGGAVAGT TTFPPAMPTT APTTVAPAVG 180 TGTAGGSGAW CVAKAGVMEA ALQSGIDYAC GMGGADCTAL QPMGSCYNPN TLQAHASYAF 240 NAYFQRNPSA ASCDFGGAGM LVSNNPSSGS CMYQTSSGST SGAGYSPTSP MTGTTPAGMT 300 PGYGMPGYGP VGTGPAVSGG GSGSTVLNAN NNPGGTSMYG PDNPTGFTGG DASGTAAASL 360 SCGWVLSLIW IFTFAYVKEK E* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-17 | 190 | 260 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-34 | 190 | 273 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84664.1 | 0 | 50 | 380 | 149 | 489 | unknown [Zea mays] |
GenBank | ACN28117.1 | 0 | 46 | 380 | 221 | 586 | unknown [Zea mays] |
GenBank | ACN28414.1 | 0 | 46 | 380 | 247 | 612 | unknown [Zea mays] |
RefSeq | NP_001132166.2 | 0 | 50 | 380 | 146 | 486 | hypothetical protein LOC100193588 [Zea mays] |
RefSeq | XP_002463588.1 | 0 | 46 | 380 | 245 | 614 | hypothetical protein SORBIDRAFT_01g002540 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-17 | 181 | 273 | 4 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |