Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G156800.1 |
Family | CBM43 |
Protein Properties | Length: 311 Molecular Weight: 33814.9 Isoelectric Point: 9.6783 |
Chromosome | Chromosome/Scaffold: 11 Start: 27454874 End: 27458661 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 138 | 219 | 1.4e-33 |
WCVARSDASNQALQTALDYACASGADCTPLQSDGLCFLPNTIQAHASYAFNSYYQRRAIAPGSCDFAGTATVAKTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 311 Download |
MVDSYKFGLL IQDSLRLKTQ SNSLSFQCIH KSANKTPHNL RKQNPHYTIY IYIKAYQKKK 60 EKNKAEKKRK EKKRRRPSPL PLFFPYSSLF ISLSLSLSLS RFTILINSFP MALPALKLPL 120 FFLSLLLTTF SVAEGASWCV ARSDASNQAL QTALDYACAS GADCTPLQSD GLCFLPNTIQ 180 AHASYAFNSY YQRRAIAPGS CDFAGTATVA KTDPSYGSCM YPSSLSTAGG LPTPTTPTTV 240 TNNPTAPTTT TTAPLGGADG SNGLNNPGLT PPFPTTDESR ASFDCMVNTS SMSLMLLVVL 300 SFILHPVWIF * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-21 | 137 | 208 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 137 | 221 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 0 | 111 | 281 | 1 | 169 | unknown [Glycine max] |
EMBL | CAB41118.1 | 5.04467e-44 | 58 | 300 | 2 | 251 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_193096.5 | 0 | 58 | 300 | 2 | 226 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 135 | 310 | 47 | 220 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518089.1 | 0 | 115 | 225 | 2 | 114 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-23 | 136 | 224 | 11 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |