Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma11g36490.1 |
Family | CBM43 |
Protein Properties | Length: 193 Molecular Weight: 19737.5 Isoelectric Point: 4.879 |
Chromosome | Chromosome/Scaffold: 11 Start: 37950205 End: 37954164 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 29 | 112 | 2.2e-32 |
WCVAKIGASEEALQTALDSACEAGGGADCAPIQPDGLCYVPNTLQAHASYAFNSFYQRNTRAPHACLFHGASTIAQTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 193 Download |
MAMRNMIVIT VTTTMVMVMI SIVGGSASWC VAKIGASEEA LQTALDSACE AGGGADCAPI 60 QPDGLCYVPN TLQAHASYAF NSFYQRNTRA PHACLFHGAS TIAQTDPSYG SCVYPSSATP 120 STAGVTNTNT TVTTPAAMPN VAAPTTTTPI HGGDGVGMNP LIPENSTSAP NSNTILTTTS 180 FLVFLLIMSL IP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-18 | 28 | 101 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-34 | 28 | 114 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14573.1 | 0 | 1 | 192 | 1 | 192 | unknown [Glycine max] |
GenBank | ACU17645.1 | 2.8026e-45 | 6 | 191 | 10 | 190 | unknown [Glycine max] |
RefSeq | NP_001148424.1 | 2e-40 | 3 | 188 | 1 | 183 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | XP_002267551.1 | 1.99993e-41 | 25 | 187 | 46 | 212 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002452133.1 | 3e-40 | 27 | 188 | 36 | 188 | hypothetical protein SORBIDRAFT_04g020230 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-21 | 26 | 118 | 10 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |