Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.166770.2 |
Family | CBM43 |
Protein Properties | Length: 150 Molecular Weight: 15629.6 Isoelectric Point: 7.1423 |
Chromosome | Chromosome/Scaffold: 01154 Start: 128896 End: 130384 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 26 | 108 | 2.3e-35 |
WCVAKAGVSQIDLQNALDWACGMGKADCRAIQKGGRCYEPDTLLSHASFAFNSYYQQNGNSDIACNFGGCATLTKKDPSYGKC |
Full Sequence |
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Protein Sequence Length: 150 Download |
MAAEAGMPVM AAPAEGNTTF IDGTTWCVAK AGVSQIDLQN ALDWACGMGK ADCRAIQKGG 60 RCYEPDTLLS HASFAFNSYY QQNGNSDIAC NFGGCATLTK KDPSYGKCDY SASSSTNSAP 120 SKSKNSPTHI CLKLVSVVSV VLNLYFGSS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-20 | 25 | 97 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-38 | 25 | 110 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85566.1 | 0 | 12 | 138 | 43 | 171 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 3 | 124 | 30 | 153 | unknown [Glycine max] |
EMBL | CBI30973.1 | 0 | 3 | 128 | 578 | 705 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274294.1 | 0 | 3 | 104 | 9 | 111 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002526606.1 | 0 | 3 | 105 | 10 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-21 | 25 | 115 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG526170 | 148 | 1 | 148 | 0 |
EB715511 | 142 | 7 | 148 | 0 |
EB715662 | 127 | 22 | 148 | 0 |
DT019806 | 109 | 3 | 110 | 0 |
DT039619 | 109 | 3 | 110 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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