Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si032661m |
Family | CBM43 |
Protein Properties | Length: 164 Molecular Weight: 16027.8 Isoelectric Point: 9.4453 |
Chromosome | Chromosome/Scaffold: 2 Start: 45281121 End: 45282746 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 18 | 77 | 9.9e-22 |
GADCNSIHENGGRYNPNTVAAHCSWAANSNYQNNKAKGATCDFTGTATLTTSDPSSSGCS |
Full Sequence |
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Protein Sequence Length: 164 Download |
MRRRPRCRRP STTPAARGAD CNSIHENGGR YNPNTVAAHC SWAANSNYQN NKAKGATCDF 60 TGTATLTTSD PSSSGCSYPT SASAVGTMTP TTGGTMGGTP GTFTLGAGTT GTGMRTGTTT 120 GTTGAGLGLG PAGTGMDTTA ATLLPSAGVA AILTVLLSAI AFA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-9 | 18 | 65 | 53 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-19 | 18 | 78 | 61 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF83296.1 | 2e-36 | 18 | 88 | 44 | 114 | unknown [Zea mays] |
GenBank | ACG46419.1 | 2e-36 | 18 | 88 | 44 | 114 | glucan endo-1,3-beta-glucosidase 3 precursor [Zea mays] |
GenBank | ACN36886.1 | 2e-32 | 18 | 86 | 44 | 112 | unknown [Zea mays] |
RefSeq | NP_001148400.1 | 2e-36 | 18 | 88 | 44 | 114 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002460971.1 | 3e-35 | 7 | 84 | 24 | 110 | hypothetical protein SORBIDRAFT_02g038510 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.0000000009 | 16 | 80 | 34 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |