Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.050890.1 |
Family | CBM43 |
Protein Properties | Length: 364 Molecular Weight: 37108.5 Isoelectric Point: 4.821 |
Chromosome | Chromosome/Scaffold: 00557 Start: 105469 End: 107972 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 167 | 248 | 9.1e-35 |
WCVARSGASEMALQSALDYACGTGGADCSQIQQSGSCYNPNTLENHASFAFNSYFQKNPSSTSCDFGGSAMVTNSNPSTGSC |
Full Sequence |
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Protein Sequence Length: 364 Download |
MAQTASKCFF FSIMSLLAIC SSGRFGGSHL GVEENASSEL KWKFPEFGRT TMHDATTNFP 60 TTPDTSTPTI ITVPSTNPVT ITPSSPAATP VSIPLTTPFT VPANSPVPLT NPVAPPVTVP 120 GAQPITNPVT TYPAPSGGAP VLTPPTNPVP VSPPATTNAP VIPGQSWCVA RSGASEMALQ 180 SALDYACGTG GADCSQIQQS GSCYNPNTLE NHASFAFNSY FQKNPSSTSC DFGGSAMVTN 240 SNPSTGSCIY PSSSSSATPA SMTPSVPTQT PTTTAPITVS PTTVTNPTTS SPVGTGMPEN 300 GSPPGVFNTD NPASSIGSTT GFGTEIPPSS STSISVAAGL RPFTCFIILT MSFITHRIIT 360 LDW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 6.0e-22 | 166 | 237 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-33 | 166 | 242 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65737.1 | 0 | 23 | 358 | 168 | 515 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001132166.2 | 0 | 68 | 359 | 185 | 488 | hypothetical protein LOC100193588 [Zea mays] |
RefSeq | XP_002276666.1 | 0 | 23 | 362 | 264 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 32 | 363 | 269 | 615 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 33 | 363 | 77 | 406 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 166 | 255 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |