Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000299794 |
Family | CBM43 |
Protein Properties | Length: 255 Molecular Weight: 26484.2 Isoelectric Point: 6.0797 |
Chromosome | Chromosome/Scaffold: 012438228 Start: 20749 End: 24076 |
Description | photosystem I subunit K |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 30 | 112 | 5.2e-35 |
WCVALPGVSQADLQNALDWACGLGMADCKPIQQGGACYEPDTLVSHASYAFNNFYQQNGNSDIACNFGGTAAVTKTNPSHGKC |
Full Sequence |
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Protein Sequence Length: 255 Download |
MEVALQDGAI PDTTLSPPEG NTTFLDGTTW CVALPGVSQA DLQNALDWAC GLGMADCKPI 60 QQGGACYEPD TLVSHASYAF NNFYQQNGNS DIACNFGGTA AVTKTNPSHG KCVYAAPGIY 120 VYDLTFVVDP VYPVSRCVIA DVKHKLSSVT CVGAIVQPMR RKGQGALGAR CDYIGSPTNL 180 IMVTTTSLML FAGRFGLAPS ANRKSTAGLK LETRDSGLQT GDPAGFTLAD TLACGSVGHI 240 IGVGVVLGLK NIGAL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01241 | PSI_PSAK | 9.0e-18 | 178 | 255 | 78 | + Photosystem I psaG / psaK. | ||
pfam07983 | X8 | 4.0e-22 | 29 | 100 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
TIGR03050 | PS_I_psaK_plant | 3.0e-35 | 173 | 255 | 83 | + photosystem I reaction center PsaK, plant form. This protein family is based on a model that separates the photosystem I PsaK subunit of chloroplasts from chloroplast PsaG protein and from Cyanobacterial PsaK, both of which show sequence similarity. | ||
smart00768 | X8 | 2.0e-41 | 29 | 114 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
PLN03070 | PLN03070 | 6.0e-48 | 154 | 255 | 102 | + photosystem I reaction center subunit psaK 247; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009522 | photosystem I |
GO:0015979 | photosynthesis |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP03873.1 | 0 | 156 | 255 | 31 | 130 | photosystem I reaction center subunit X psaK [Nicotiana tabacum] |
GenBank | ACJ85566.1 | 0 | 10 | 118 | 37 | 145 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 7 | 121 | 31 | 145 | unknown [Glycine max] |
EMBL | CAN77761.1 | 0 | 154 | 255 | 28 | 129 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280687.1 | 0 | 154 | 255 | 28 | 129 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wsf_K | 0 | 160 | 255 | 34 | 126 | K Chain K, Improved Model Of Plant Photosystem I |
PDB | 2wse_K | 0 | 160 | 255 | 34 | 126 | K Chain K, Improved Model Of Plant Photosystem I |
PDB | 2wsc_K | 0 | 160 | 255 | 34 | 126 | N Chain N, Improved Model Of Plant Photosystem I |
PDB | 3lw5_K | 0 | 172 | 255 | 1 | 84 | 4 Chain 4, Improved Model Of Plant Photosystem I |
PDB | 2jon_A | 2e-21 | 29 | 116 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN549653 | 121 | 1 | 118 | 0 |
CV273745 | 121 | 1 | 118 | 0 |
DT019806 | 121 | 1 | 118 | 0 |
FK001098 | 115 | 7 | 121 | 0 |
DT039619 | 121 | 1 | 118 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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