Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.H01316.1 |
Family | CBM43 |
Protein Properties | Length: 522 Molecular Weight: 54806.6 Isoelectric Point: 8.3753 |
Chromosome | Chromosome/Scaffold: 8 Start: 15926739 End: 15929087 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 344 | 425 | 1.4e-33 |
WCVARSGVSEIALQQALDYACGIGGADCSQIQEGANCYNPNSLQNHASYAFNSYYQKNPVPTSCDFGGVASIVNVNPSVGSC |
Full Sequence |
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Protein Sequence Length: 522 Download |
MKNVLHSEPS AVSLLKLKAQ TLASHPQARL EGIILGFGYQ NVGPTELRKI SSTLELVNGV 60 MNSEKKMKVS VGFPLAFLEK LGKDDSEERR RLFSSIEKLA PMVIIEDNIT SEPGNRDKVV 120 RSVIHRALLS CSRFSPNHIP LVLPLKTPVF RSTAEAALLI NSVLKSLESN AQIKPGRIVE 180 LYTDASDMHE LRYQDVQYKR SVSFHRELLS HLKQSLHDSV TSPTTTFPVT PVSPTPVITP 240 DAPPTIITVP STTPVTATPE NPAAPIIVPP TNPVNPPVPI TNPAGTPIAV PGAQPVTNPV 300 TTYPSPPGGA PVTTPVTTPV TTPVTNPVAP PVTTNAPAVP GQSWCVARSG VSEIALQQAL 360 DYACGIGGAD CSQIQEGANC YNPNSLQNHA SYAFNSYYQK NPVPTSCDFG GVASIVNVNP 420 SVGSCIYPTS QSSSTPATTT TTPTPTTASM SPPSTGVPIS SSGTPPAVFN PVSAGPTGYT 480 VGSPLAGNTS ISTSTKLEPV RYSGCVVFLT TLVVAKMMLA K* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1327 | COG1327 | 0.0007 | 89 | 207 | 131 | + Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription] | ||
pfam07983 | X8 | 5.0e-23 | 343 | 414 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-40 | 343 | 427 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN65737.1 | 0 | 66 | 519 | 59 | 517 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001132166.2 | 0 | 206 | 465 | 146 | 421 | hypothetical protein LOC100193588 [Zea mays] |
RefSeq | XP_002276666.1 | 0 | 1 | 519 | 88 | 613 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319461.1 | 0 | 1 | 519 | 87 | 613 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512573.1 | 0 | 117 | 519 | 3 | 404 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000002 | 343 | 429 | 12 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GE633885 | 141 | 287 | 427 | 0 |
DV446522 | 141 | 287 | 427 | 0 |
DC655694 | 142 | 286 | 427 | 0 |
EY197454 | 232 | 287 | 510 | 0 |
EX172611 | 232 | 287 | 510 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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