Browse dbCAN-PUL Entries

PULID Characterization Method(s) Substrate Organism Publication Publish Date Type Num Genes Num CAZymes CazyFamily
PUL0036 Southern Blot, transposon mutagenesis emulsan Acinetobacter venetianus 11429470
Analysis of the wee gene cluster responsible for the biosynthesis of the polymeric bioemulsifier from the oil-degrading strain Acinetobacter lwoffii RAG-1. Microbiology (Reading). 2001 Jul;147(Pt 7):1937-1946. doi: 10.1099/00221287-147-7-1937.
2001 Jul biosynthesis 22 3 PL12, PL0, GT4
PUL0248 sequence homology analysis capsule polysaccharide Vibrio vulnificus 24102883
Role of capsular polysaccharide (CPS) in biofilm formation and regulation of CPS production by quorum-sensing in Vibrio vulnificus. Mol Microbiol. 2013 Nov;90(4):841-57. doi: 10.1111/mmi.12401. Epub 2013 Oct 10.
2013 Nov degradation 19 1 PL12_3, PL0
PUL0250 sequence homology analysis capsule polysaccharide Vibrio vulnificus 24102883
Role of capsular polysaccharide (CPS) in biofilm formation and regulation of CPS production by quorum-sensing in Vibrio vulnificus. Mol Microbiol. 2013 Nov;90(4):841-57. doi: 10.1111/mmi.12401. Epub 2013 Oct 10.
2013 Nov degradation 30 1 GT4, GT4, PL12, PL0, GT4
PUL0555 gene deletion mutant and growth assay, qRT-PCR, microarray, enzyme activity assay N-glycan Bacteroides fragilis 25139987
Efficient utilization of complex N-linked glycans is a selective advantage for Bacteroides fragilis in extraintestinal infections. Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):12901-6. doi: 10.1073/pnas.1407344111. Epub 2014 Aug 19.
2014 Sep 2 degradation 9 5 GH154, GH2, GH20, GH88, PL0, PL33_1
PUL0607 enzyme activity assay, clone and expression, liquid chromatography and mass spectrometry porphyran Wenyingzhuangia fucanilytica strain CZ1127 32520542
Characterization of a Novel Porphyranase Accommodating Methyl-galactoses at Its Subsites. J Agric Food Chem. 2020 Jul 1;68(26):7032-7039. doi: 10.1021/acs.jafc.0c02404. Epub 2020 Jun 22.
2020 Jul 1 degradation 22 8 GH2, CBM67, CBM51, GH141, PL0, GH105, GH154, GH16_11, GH16, 3.2.1.178, GH117, GH16_11, GH16, GH16_14, GH29