Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g23640.1 |
Family | CBM43 |
Protein Properties | Length: 502 Molecular Weight: 53607.8 Isoelectric Point: 6.7783 |
Chromosome | Chromosome/Scaffold: 1 Start: 19040406 End: 19044453 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 454 | 1.1e-29 |
CVANSSASHSALKQSLDWACGPGSANCSAIQPGQPCYKSDDIVAVASYAFNDYYHRTQTSGGTCNFNGTATISSTDPSHGSC | |||
GH17 | 34 | 355 | 0 |
VGVHVGTGVSDLPSPSDIVSILKAKRIQHVRLVDSDHKMLVALANTGIEVMVGVPNDQLLRVGQSRSTAADWINKNVAAYIPATNITYIAVGDEVLTTIP NAALVLVPALQFLQSALLAANLNTQVKISSPHSMDMISKAFPPSTATFNSTWSSIMSQYLQFLNNTGSSFMLNAQPYYGYVKGQGVFPLEYALFRSLNPN SKIADPNSNLFYTNMFDAMVDAAYNSMQAMNFTGIPVMVTASGWPWRGARNEPAADVDNALAYNTNLIRHVLNSSGTPSQPKNQVSTYLFELFSEDRRTG PVSEQNWGIMFTNASAVYSLAF |
Full Sequence |
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Protein Sequence Length: 502 Download |
MLGRRRNNML PKRLEGVLLL LFMLMVSNAS GAFVGVHVGT GVSDLPSPSD IVSILKAKRI 60 QHVRLVDSDH KMLVALANTG IEVMVGVPND QLLRVGQSRS TAADWINKNV AAYIPATNIT 120 YIAVGDEVLT TIPNAALVLV PALQFLQSAL LAANLNTQVK ISSPHSMDMI SKAFPPSTAT 180 FNSTWSSIMS QYLQFLNNTG SSFMLNAQPY YGYVKGQGVF PLEYALFRSL NPNSKIADPN 240 SNLFYTNMFD AMVDAAYNSM QAMNFTGIPV MVTASGWPWR GARNEPAADV DNALAYNTNL 300 IRHVLNSSGT PSQPKNQVST YLFELFSEDR RTGPVSEQNW GIMFTNASAV YSLAFEDVAA 360 NNTDSPALRG MFCVANSSAS HSALKQSLDW ACGPGSANCS AIQPGQPCYK SDDIVAVASY 420 AFNDYYHRTQ TSGGTCNFNG TATISSTDPS HGSCIFLGST GANGSGNGAA SGPVSQDSFA 480 SGLQSCWLAH LVVLLPVVLL L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-16 | 373 | 443 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-34 | 372 | 456 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-72 | 34 | 355 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67465.1 | 0 | 28 | 501 | 82 | 555 | hypothetical protein OsJ_24859 [Oryza sativa Japonica Group] |
RefSeq | NP_001060087.1 | 0 | 30 | 501 | 170 | 641 | Os07g0577300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131285.1 | 0 | 9 | 501 | 1 | 491 | hypothetical protein LOC100192598 [Zea mays] |
RefSeq | NP_001149308.1 | 0 | 9 | 500 | 1 | 492 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | XP_002460914.1 | 0 | 9 | 501 | 1 | 493 | hypothetical protein SORBIDRAFT_02g037380 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 355 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 34 | 355 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 34 | 355 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 4gzj_A | 0 | 34 | 355 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 4gzi_A | 0 | 34 | 355 | 3 | 314 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |