Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.169000.1 |
Family | GH10 |
Protein Properties | Length: 557 Molecular Weight: 62895.5 Isoelectric Point: 6.203 |
Chromosome | Chromosome/Scaffold: 01163 Start: 3298 End: 7122 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 209 | 475 | 0 |
KQISKDFAFGSAIAKSIIGNLPYQDWFVKRFNAAVFENELKWYATEPKPGVLNYTTADRMLEFVRANQITARGHNIFWEDPKYTPLWVQNLTGEELKSAV DSRIKGLLSRYKDEFIHWDVSNEMLHFDFYEKSLGANATLHFYKTAHEIDPLATLFMNEFNVVETCSDVKSTVDNYINRLKELKRNGVSMDGIGLEGHFT IPNPPLMRAILDKLATLNLPIWLTEVDISHSLGQETQASYLEVVLREGFSHPAVGGILLWSALDPNG |
Full Sequence |
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Protein Sequence Length: 557 Download |
MRNLHPFSTF FLFIFLFLPL LLVLVHSYDG PLYDYTAHTE CKLRPEKPLY NGGILKNQAL 60 SIQSIGDSSN AIYSPAFLLH NLTARTYYSF SSWVKLGGAV SSVVRASLRM ENETYNCIGT 120 VLAKHGCWSF LKGGFFMNLP SNFSILFFQI FDEGDANISI DNASLQPFTE EEWRVNQQLT 180 INSVRKRAVT VHVSDKQGGR LEGALINVKQ ISKDFAFGSA IAKSIIGNLP YQDWFVKRFN 240 AAVFENELKW YATEPKPGVL NYTTADRMLE FVRANQITAR GHNIFWEDPK YTPLWVQNLT 300 GEELKSAVDS RIKGLLSRYK DEFIHWDVSN EMLHFDFYEK SLGANATLHF YKTAHEIDPL 360 ATLFMNEFNV VETCSDVKST VDNYINRLKE LKRNGVSMDG IGLEGHFTIP NPPLMRAILD 420 KLATLNLPIW LTEVDISHSL GQETQASYLE VVLREGFSHP AVGGILLWSA LDPNGCYQMC 480 LTDANFKNLP TGDVVDKLLK EWKTGDIEAR TDNHGSFSFY GFLGEYEVSV KYDNRSAAST 540 FPVSVGDETK HFSIQL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-41 | 210 | 437 | 240 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-56 | 211 | 474 | 280 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-75 | 248 | 495 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI37893.1 | 0 | 5 | 556 | 76 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 29 | 556 | 30 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 24 | 556 | 19 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002446197.1 | 0 | 27 | 556 | 35 | 565 | hypothetical protein SORBIDRAFT_06g003350 [Sorghum bicolor] |
RefSeq | XP_002534153.1 | 0 | 93 | 556 | 10 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1e0v_A | 1e-30 | 217 | 474 | 16 | 272 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 1xas_A | 1e-30 | 217 | 474 | 16 | 272 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1v0n_A | 2e-30 | 217 | 474 | 16 | 272 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1v0m_A | 2e-30 | 217 | 474 | 16 | 272 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |
PDB | 1v0l_A | 2e-30 | 217 | 474 | 16 | 272 | A Chain A, Crystal Structure, At 2.6 Angstroms Resolution, Of The Streptomyces Lividans Xylanase A, A Member Of The F Family Of Beta-1,4-D-Glycanses |