Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.G01209.1 |
Family | GH10 |
Protein Properties | Length: 306 Molecular Weight: 34812.6 Isoelectric Point: 4.9412 |
Chromosome | Chromosome/Scaffold: 7 Start: 20474606 End: 20476872 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 8 | 201 | 1.54143e-44 |
STDYQNWFASRFRYTTFTNAMKWYSTEAKQGQENYTIADAMVKFSQDNGISIRGHNVFWDDPNYQPDWVKTLLPEDLRKAAEKRINSVVSRYAGKLIAWD VVNENLHFSFFEDNLGKNASSIYYSTSYKLDPTPRMFLNEYNTIEYCGDEKVSPGNYKKRFKEIFSYPGNEDIPAGIGVQGHFGSQLAQYLEEI |
Full Sequence |
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Protein Sequence Length: 306 Download |
MNFHILESTD YQNWFASRFR YTTFTNAMKW YSTEAKQGQE NYTIADAMVK FSQDNGISIR 60 GHNVFWDDPN YQPDWVKTLL PEDLRKAAEK RINSVVSRYA GKLIAWDVVN ENLHFSFFED 120 NLGKNASSIY YSTSYKLDPT PRMFLNEYNT IEYCGDEKVS PGNYKKRFKE IFSYPGNEDI 180 PAGIGVQGHF GSQLAQYLEE ILREAFSHPA VEGIIMFAGP AYTGFNATAL TNKSFNNMPA 240 GDIVDNLIKE WKSPDFEACT NDGGFFSTSL FHGEYEITIT DPATNCSSTS RFEVTRDSSG 300 RTFHF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0821 | gcpE | 0.009 | 154 | 215 | 66 | + 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism] | ||
COG3693 | XynA | 9.0e-27 | 26 | 191 | 178 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-36 | 5 | 192 | 199 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-54 | 28 | 242 | 270 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 1 | 304 | 240 | 576 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 1 | 305 | 234 | 571 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 1 | 299 | 205 | 536 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313183.1 | 0 | 1 | 302 | 167 | 501 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 1 | 299 | 208 | 539 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tux_A | 2e-20 | 19 | 202 | 40 | 222 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1ta3_B | 2e-20 | 5 | 192 | 25 | 211 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
PDB | 1i1x_A | 5e-20 | 17 | 201 | 38 | 222 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
PDB | 1i1w_A | 5e-20 | 17 | 201 | 38 | 222 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1bg4_A | 7e-20 | 19 | 159 | 41 | 185 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HS044964 | 218 | 103 | 287 | 0 |
DV141191 | 193 | 1 | 193 | 0 |
EG984009 | 203 | 1 | 203 | 0 |
GO011972 | 192 | 1 | 192 | 0 |
DV140884 | 178 | 16 | 193 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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