Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g035723m |
Family | GH10 |
Protein Properties | Length: 529 Molecular Weight: 59655.1 Isoelectric Point: 5.3044 |
Chromosome | Chromosome/Scaffold: 00023 Start: 375642 End: 377898 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 184 | 463 | 0 |
SKDFPFGSAIASTILGNLPYQKWFVERFNAAVFENELKWYATEPEQGKINYTIADQMMEFVRSNQLIARGHNIFWEDPKYTPAWVRNLTGPALQSAVNSR IQSLMNKYKEEFIHWDVSNEMLHFDFYEQRLGHDATLHFYETAHQSDPLATLFMNEFNVVETCSDENSTVDRYISRLRELKRGGVLMDGIGLESHFTVPN LPLMRAILDKLATLNLPIWLTEVDISGKLDKETQAVYLEQVLREGFSHPSVNGIMLWTALHPNGCYQMCLTDNNLQNLPA |
Full Sequence |
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Protein Sequence Length: 529 Download |
GPLYDFTAYT ECKELPEQPL YNGGMLKNHP PENFSSIAHF STGFYTPAFI LHNLTPGTIY 60 CFSIWLKIEG ANSAHVRASL KTENSVYNCV GSAAAKQGCW SFLKGGFVLD SPSNLSILFF 120 QNSDDRDINI AVASASLQPF TDEQWRFNQQ YIINTERKRA VTIHAADGSG DTLQGAEITI 180 EQVSKDFPFG SAIASTILGN LPYQKWFVER FNAAVFENEL KWYATEPEQG KINYTIADQM 240 MEFVRSNQLI ARGHNIFWED PKYTPAWVRN LTGPALQSAV NSRIQSLMNK YKEEFIHWDV 300 SNEMLHFDFY EQRLGHDATL HFYETAHQSD PLATLFMNEF NVVETCSDEN STVDRYISRL 360 RELKRGGVLM DGIGLESHFT VPNLPLMRAI LDKLATLNLP IWLTEVDISG KLDKETQAVY 420 LEQVLREGFS HPSVNGIMLW TALHPNGCYQ MCLTDNNLQN LPAGNIVDKL LKEWQTGEVT 480 GHTDGHGSFS FYGFLGEYTV SVKYGNRTAN STFSLCQGDE TRHVTIRV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-39 | 185 | 424 | 256 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 7.0e-56 | 184 | 440 | 273 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-75 | 220 | 465 | 267 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94921.1 | 0 | 4 | 528 | 34 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 1 | 528 | 101 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 1 | 528 | 31 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 1 | 528 | 25 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 61 | 528 | 6 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 1e-31 | 189 | 440 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 7e-31 | 189 | 419 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 7e-31 | 189 | 419 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 7e-31 | 189 | 419 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 7e-31 | 189 | 419 | 16 | 250 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES803339 | 253 | 174 | 426 | 0 |
DY024035 | 263 | 243 | 502 | 0 |
GR953916 | 292 | 163 | 454 | 0 |
CX705541 | 238 | 292 | 529 | 0 |
GO498667 | 216 | 262 | 477 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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