Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os05g23350.1 |
Family | GH10 |
Protein Properties | Length: 572 Molecular Weight: 62807.7 Isoelectric Point: 6.2934 |
Chromosome | Chromosome/Scaffold: 5 Start: 13327998 End: 13330268 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 225 | 510 | 0 |
ENRFPFGSCINKTAIRNPKFVDFFCENFDWAVFENELKWYSTEPQRGQINYRDADELLDFCHRYGKSARGHCIFWAVDGDVQQWVKDLGRDDLAAAVQGR LHGLLSRYAGRFRHYDVNNEMLHGRFYRDRLGDGVAPLMFREAARLDPAARLFVNDYNVLRGNDPNATPEKYVELVDALRRGGAAVGGIGVQGHMDSPVA GQVIRAALDKLAAAGGAPIWITELDVSEPDVGLRADDLEVVLREAYAHPAVEGVVLWGFMEGQMWRRDAYLVDADGTVNEAGQRFL |
Full Sequence |
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Protein Sequence Length: 572 Download |
MALAHEVAFE VNLIEDDGGL AGWAPVGTRT ALSSHAERDT AMLISGAVSA AEPNERIRRS 60 SGRYIVASRR ADEEDGLRRA VPAGALVPRV TYRVVGWVSV QGQGDGRHHA VRVGLRVDGD 120 GGDDERGSWL DCGAARVEVG GGWAEINGAF RLRASPRVAA VHVHGAPAGV DVKVMDLQVY 180 ATDRKARLTQ LKEQTDKVRK RDVILNLGGG ATMAGASIRV AQLLENRFPF GSCINKTAIR 240 NPKFVDFFCE NFDWAVFENE LKWYSTEPQR GQINYRDADE LLDFCHRYGK SARGHCIFWA 300 VDGDVQQWVK DLGRDDLAAA VQGRLHGLLS RYAGRFRHYD VNNEMLHGRF YRDRLGDGVA 360 PLMFREAARL DPAARLFVND YNVLRGNDPN ATPEKYVELV DALRRGGAAV GGIGVQGHMD 420 SPVAGQVIRA ALDKLAAAGG APIWITELDV SEPDVGLRAD DLEVVLREAY AHPAVEGVVL 480 WGFMEGQMWR RDAYLVDADG TVNEAGQRFL QLQREWRSDA RGIVDGDGRF KFRGFHGTYV 540 AQVTTATGKM LKTFTVEKGD NSLELDLDIE I* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 4.0e-25 | 204 | 494 | 316 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-57 | 220 | 510 | 311 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 8.0e-60 | 261 | 509 | 270 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005575 | cellular_component |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY97420.1 | 0 | 1 | 571 | 1 | 571 | hypothetical protein OsI_19350 [Oryza sativa Indica Group] |
GenBank | EAY97421.1 | 0 | 213 | 571 | 1 | 359 | hypothetical protein OsI_19351 [Oryza sativa Indica Group] |
GenBank | EAY97529.1 | 0 | 1 | 569 | 1 | 581 | hypothetical protein OsI_19457 [Oryza sativa Indica Group] |
GenBank | EEE63139.1 | 0 | 1 | 571 | 1 | 571 | hypothetical protein OsJ_17947 [Oryza sativa Japonica Group] |
RefSeq | NP_001055187.1 | 0 | 1 | 569 | 1 | 581 | Os05g0319900 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tux_A | 1e-33 | 215 | 503 | 1 | 289 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1x_A | 2e-33 | 216 | 503 | 2 | 289 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 2e-33 | 216 | 503 | 2 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 7e-33 | 216 | 503 | 2 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1gor_A | 6e-32 | 216 | 503 | 2 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB647597 | 250 | 133 | 382 | 0 |
FL860597 | 242 | 281 | 520 | 0 |
GO850973 | 331 | 150 | 478 | 0 |
HO159988 | 214 | 216 | 428 | 0 |
DR110436 | 279 | 226 | 504 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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