Basic Information | |
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Species | Prunus persica |
Cazyme ID | ppa023031m |
Family | GH10 |
Protein Properties | Length: 548 Molecular Weight: 60976.1 Isoelectric Point: 9.2227 |
Chromosome | Chromosome/Scaffold: 8 Start: 15378829 End: 15381417 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 194 | 452 | 0 |
KSPTFPFGCSLTKYVLKNTAYQNWFLSRFTVATFGDEMKWYSTENTQGHEDYSMADAMLQFTKQHNIAVRGHNVFWDDPFYQLGWVKSLSPQQLASATQK RLNSVMNKYKGQLIGWDVVNENLHFNFFESKMGANASALFYNWAIRADAATTLFLNEYNTIEESADEATTPAKYLRKLKEMRTFPGNERGRFAIGLESHF TTPNIPYIRSSIDTLAAAGVPIWITELDVANGPKQTLYLEQILRETYAHPHIQGIVLWA |
Full Sequence |
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Protein Sequence Length: 548 Download |
MSCRCLANPH KPQYGGGVIV NPELNEGLKG WSSFGDAKIQ HRESKGNKFI VALGRNQQHA 60 SVSQKVSLQS GKLYTFSAWI QASKGGVPVT AMFKTGSGTY MRAGSIVAES NCWSMLKGGF 120 PASASGPAEL YFESKDTSVE IWVDSISLQP FTEEEWKSHQ DQSIAKIRKS NVKIQAVDKQ 180 GKPLANAKIS IQQKSPTFPF GCSLTKYVLK NTAYQNWFLS RFTVATFGDE MKWYSTENTQ 240 GHEDYSMADA MLQFTKQHNI AVRGHNVFWD DPFYQLGWVK SLSPQQLASA TQKRLNSVMN 300 KYKGQLIGWD VVNENLHFNF FESKMGANAS ALFYNWAIRA DAATTLFLNE YNTIEESADE 360 ATTPAKYLRK LKEMRTFPGN ERGRFAIGLE SHFTTPNIPY IRSSIDTLAA AGVPIWITEL 420 DVANGPKQTL YLEQILRETY AHPHIQGIVL WAGPTEKGCY RMCLTDNINF KNLPNGDVVD 480 KLIHEWGLKG LVSGTTDAKG FFEASLSHGD YEVSITHPTS KSSSLVQRLN VKPTASSQKP 540 LFLKFSS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 5.0e-5 | 25 | 138 | 124 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-29 | 230 | 422 | 207 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-45 | 198 | 457 | 282 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-71 | 231 | 479 | 274 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN10199.1 | 0 | 2 | 543 | 37 | 581 | endoxylanase [Carica papaya] |
RefSeq | XP_002264556.1 | 0 | 2 | 547 | 117 | 658 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002264605.1 | 0 | 2 | 547 | 32 | 574 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313180.1 | 0 | 4 | 517 | 2 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532418.1 | 0 | 2 | 545 | 28 | 566 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v0n_A | 4e-23 | 200 | 451 | 16 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1v0m_A | 4e-23 | 200 | 451 | 16 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1v0l_A | 4e-23 | 200 | 451 | 16 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1v0k_A | 4e-23 | 200 | 451 | 16 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1od8_A | 4e-23 | 200 | 451 | 16 | 266 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266128 | 292 | 213 | 502 | 0 |
AM722845 | 266 | 164 | 428 | 0 |
GR150167 | 264 | 9 | 271 | 0 |
FL914612 | 262 | 156 | 416 | 0 |
EX266128 | 35 | 492 | 524 | 4.2 |
Sequence Alignments (This image is cropped. Click for full image.) |
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