Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.E04042.1 |
Family | CBM43 |
Protein Properties | Length: 538 Molecular Weight: 58056.4 Isoelectric Point: 6.2422 |
Chromosome | Chromosome/Scaffold: 5 Start: 69490719 End: 69493445 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 393 | 474 | 6.2e-32 |
CIAMGGVDSRTLQAALDWACGPGQANCTEIQPGENCFKPNNVKSHASYAFDSYYQKEGKVAGSCDFKGAAMITTTDPGHGDC | |||
GH17 | 55 | 374 | 0 |
VGLNIGTEVSNLVSPEALVSFLQVQKIAHVRLYDANPDILTALARSKIRVIISVPNNQILAIGSSNATAVAWISRNVLAYYPKTLITGIAVGDEVLTTVP SYAPILVPAIEFLYSALVAANLHNEIKISTPHAASLILDTFPPSQAFFNQSLSSVIVPLLRFLSRTGSPLMMNLYPYYVFMENKGVVPLANSLFRPIAPS KEMVDPNTLLHYTNVLDAMIDAAYYSMKNFNFTDVKVLVTETGWPSKGDSKEPYATIDYADTYNSNLIKHVLDKSGTPLHPELTSNVYIYELFNEDLRSP PLSEASWGLFNGDLTPAYLL |
Full Sequence |
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Protein Sequence Length: 538 Download |
MKERAVPCFG NGELGMVVPV FLAAVFLLCS GIPAGSSPLA VQIKRTRGPR DEPFVGLNIG 60 TEVSNLVSPE ALVSFLQVQK IAHVRLYDAN PDILTALARS KIRVIISVPN NQILAIGSSN 120 ATAVAWISRN VLAYYPKTLI TGIAVGDEVL TTVPSYAPIL VPAIEFLYSA LVAANLHNEI 180 KISTPHAASL ILDTFPPSQA FFNQSLSSVI VPLLRFLSRT GSPLMMNLYP YYVFMENKGV 240 VPLANSLFRP IAPSKEMVDP NTLLHYTNVL DAMIDAAYYS MKNFNFTDVK VLVTETGWPS 300 KGDSKEPYAT IDYADTYNSN LIKHVLDKSG TPLHPELTSN VYIYELFNED LRSPPLSEAS 360 WGLFNGDLTP AYLLHVSDTG GFLANDTTNQ TYCIAMGGVD SRTLQAALDW ACGPGQANCT 420 EIQPGENCFK PNNVKSHASY AFDSYYQKEG KVAGSCDFKG AAMITTTDPG HGDCIFPGSK 480 ESNNTGQTNS TDSSGAANKL GLNTSRSGGI GALVRAFQLL LATRFSLFFS IPMLMPR* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 287 | 367 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-21 | 391 | 463 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-40 | 391 | 476 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-81 | 55 | 372 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17632.1 | 0 | 32 | 470 | 22 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
EMBL | CBI23232.1 | 0 | 25 | 504 | 20 | 498 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002316541.1 | 0 | 67 | 535 | 1 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332610.1 | 0 | 67 | 535 | 1 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518468.1 | 0 | 17 | 534 | 13 | 531 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 55 | 377 | 3 | 315 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3ur8_A | 0 | 55 | 377 | 3 | 315 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 3ur7_B | 0 | 55 | 377 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 55 | 377 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 55 | 377 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |