Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G092600.1 |
Family | CBM43 |
Protein Properties | Length: 471 Molecular Weight: 50139.2 Isoelectric Point: 4.6543 |
Chromosome | Chromosome/Scaffold: 02 Start: 11761730 End: 11763479 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 382 | 465 | 5.7e-33 |
WCMASPNAEAEELQEGLDYACGEGGADCGPIQPNGACYNPNSLVAHASYAYNSYYQKKARVSGSCFFSGTAYVSTQPPSFGNCQ | |||
GH17 | 25 | 343 | 0 |
VGINYGRVADNLPPPDKVVQLLKSQGVAKVKIFDSDSAVLTALANSGISVVVCLPNEQLASAANDQSFSDGWVQANIAKYYPATKIEAIAIGNEVIAENI TDTTKFVVPAMKTIQASLVKLKLDSNIKVSSPVAISCLGNSYPASAGSFKTDQVQSTIIPMLDFLRETGSYLMVNVYPFFAYKDNSKTISLDYSLFKDNP GVVDSGNGLRYKSLFEAQVDAVYAAMSALTYDDLKLVVTETGWPSAGDAAEVGASQDNAAAYNGNLVRRVLTGNGTPLRPNDPLNVYIFALFNENQKPGP TSERNYGLFYPNEQRVYNI |
Full Sequence |
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Protein Sequence Length: 471 Download |
MASLSFFSFL ILFLSAIAVS DAGSVGINYG RVADNLPPPD KVVQLLKSQG VAKVKIFDSD 60 SAVLTALANS GISVVVCLPN EQLASAANDQ SFSDGWVQAN IAKYYPATKI EAIAIGNEVI 120 AENITDTTKF VVPAMKTIQA SLVKLKLDSN IKVSSPVAIS CLGNSYPASA GSFKTDQVQS 180 TIIPMLDFLR ETGSYLMVNV YPFFAYKDNS KTISLDYSLF KDNPGVVDSG NGLRYKSLFE 240 AQVDAVYAAM SALTYDDLKL VVTETGWPSA GDAAEVGASQ DNAAAYNGNL VRRVLTGNGT 300 PLRPNDPLNV YIFALFNENQ KPGPTSERNY GLFYPNEQRV YNIPLSQKGL NGNQSPPASN 360 VNQTAPVNNW GGVSKATSGQ TWCMASPNAE AEELQEGLDY ACGEGGADCG PIQPNGACYN 420 PNSLVAHASY AYNSYYQKKA RVSGSCFFSG TAYVSTQPPS FGNCQFPTGY * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-22 | 381 | 453 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 381 | 466 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-108 | 25 | 343 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAZ40342.1 | 0 | 18 | 470 | 15 | 468 | beta-1,3-glucanase 2 [Ziziphus jujuba] |
RefSeq | XP_002274828.1 | 0 | 1 | 470 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302861.1 | 0 | 6 | 470 | 5 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316783.1 | 0 | 22 | 470 | 1 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529472.1 | 0 | 22 | 470 | 28 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 343 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 25 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 25 | 343 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 25 | 346 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 25 | 346 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |