Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G094500.1 |
Family | CBM43 |
Protein Properties | Length: 493 Molecular Weight: 52737.9 Isoelectric Point: 4.8783 |
Chromosome | Chromosome/Scaffold: 04 Start: 14150517 End: 14155886 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 361 | 442 | 8.8e-32 |
CVAKDDASEDKLRDGINWACGQGQANCSAIQSGQPCYLPNNIKNHASYAYNDYYQKMHTVGGTCDFDGTATTTTIDPSYGSC | |||
GH17 | 25 | 345 | 0 |
VGVNIGTDVSSMPPASDVVAIVKAHQITHIRLYDADPHMLKALAGSGIEVTVGVTNEEVLGIGESASAAAAWINKNVAAYMPSTNITAIAVGSEVLTSVP HAAPVLVTAMNNLHKALVAADLNFQVKVSTPQSMDIIPKPFPPSTATFNSSWNSTIYQLLQFLKNTNSYYMLNAYPYYGYTNGNGIFPIDYALFKPLPSV KQIVDPNTLFHYNSMFDAMVDATYYSMDALNFSVIPIIVTETGWPWQGGSNEPDATVENAETFINKLIQRVSNNSGPPSQPTIPINTYIYELFNEDKRPG PISEKNWGLLFTNGTAVFPLS |
Full Sequence |
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Protein Sequence Length: 493 Download |
MILERCLGSM LLVLSMLSNV LGAFVGVNIG TDVSSMPPAS DVVAIVKAHQ ITHIRLYDAD 60 PHMLKALAGS GIEVTVGVTN EEVLGIGESA SAAAAWINKN VAAYMPSTNI TAIAVGSEVL 120 TSVPHAAPVL VTAMNNLHKA LVAADLNFQV KVSTPQSMDI IPKPFPPSTA TFNSSWNSTI 180 YQLLQFLKNT NSYYMLNAYP YYGYTNGNGI FPIDYALFKP LPSVKQIVDP NTLFHYNSMF 240 DAMVDATYYS MDALNFSVIP IIVTETGWPW QGGSNEPDAT VENAETFINK LIQRVSNNSG 300 PPSQPTIPIN TYIYELFNED KRPGPISEKN WGLLFTNGTA VFPLSLGGPS QITGNSTAVF 360 CVAKDDASED KLRDGINWAC GQGQANCSAI QSGQPCYLPN NIKNHASYAY NDYYQKMHTV 420 GGTCDFDGTA TTTTIDPSYG SCIFTGSSNS STGRESLPPT ALGPISPGGS TKLPLSKIQF 480 LISATCLLVV LL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 257 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-15 | 361 | 417 | 62 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-28 | 360 | 444 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-78 | 25 | 345 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 36 | 469 | 1 | 435 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 26 | 447 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 469 | 1 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 26 | 444 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 36 | 492 | 1 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 25 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 25 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 25 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 25 | 346 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |