Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G078300.1 |
Family | CBM43 |
Protein Properties | Length: 507 Molecular Weight: 55413.6 Isoelectric Point: 4.9932 |
Chromosome | Chromosome/Scaffold: 10 Start: 11365853 End: 11368759 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 448 | 2.8e-31 |
WCIASSKASEADLQNALDWACGPGNVDCSPIQPSQPCFEPDNTLSHASFAFNSYYQQNGATDVACSFGGNGVKVDKDPSYDNC | |||
GH17 | 26 | 344 | 0 |
VGVCYGRNADDLPTPDKVVKLVQLHKIKYLRIYDSNIQVLKAFANTGVELMVGVPNSDLLAFSQFQSNVDSWLKNSILPYYPATKIAYITVGLEVTESPD NATALVVPAMQNVLTALKKVGLHKRIKVSSTHSLGVLSRSFPPSAGAFNSSHAFFLKPMLEFLAENHSPFMIDLYPYYAYRDSPSNVSLDYALFESSSEV IDPNTGLLYTNMFDAQIDALYFALMALNFRTTQVMVTETGWPSKGSPKEKAATPDNAQTYNANLIHHVINDSGTPAKPGEELDVYIFSLFNENRKPGPES ERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 507 Download |
MASRFNLVFA VSLLLLLLDF CRGSIVGVCY GRNADDLPTP DKVVKLVQLH KIKYLRIYDS 60 NIQVLKAFAN TGVELMVGVP NSDLLAFSQF QSNVDSWLKN SILPYYPATK IAYITVGLEV 120 TESPDNATAL VVPAMQNVLT ALKKVGLHKR IKVSSTHSLG VLSRSFPPSA GAFNSSHAFF 180 LKPMLEFLAE NHSPFMIDLY PYYAYRDSPS NVSLDYALFE SSSEVIDPNT GLLYTNMFDA 240 QIDALYFALM ALNFRTTQVM VTETGWPSKG SPKEKAATPD NAQTYNANLI HHVINDSGTP 300 AKPGEELDVY IFSLFNENRK PGPESERNWG LFYPDQTSVY NLDFTGNGIV DVTNSGNGTN 360 SNVTTWCIAS SKASEADLQN ALDWACGPGN VDCSPIQPSQ PCFEPDNTLS HASFAFNSYY 420 QQNGATDVAC SFGGNGVKVD KDPSYDNCIY VTTKGINKTA TSNMTSIAST SSSRRTEVCA 480 WIASFFLMML VSFVLNPEKV LDASIS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-7 | 64 | 335 | 277 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-22 | 366 | 437 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-38 | 366 | 450 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-110 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 466 | 1 | 469 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 466 | 1 | 469 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | XP_002283473.1 | 0 | 1 | 494 | 1 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 21 | 453 | 22 | 454 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 484 | 1 | 487 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 347 | 3 | 317 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 347 | 3 | 317 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 26 | 347 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 347 | 3 | 317 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |