Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G126400.4 |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 49402.8 Isoelectric Point: 5.141 |
Chromosome | Chromosome/Scaffold: 10 Start: 26736100 End: 26741082 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 326 | 407 | 4.3e-31 |
CVAKDDASEGKLQDGLNWACGQGQANCSVIQSGQPCYLPNNTKNHASYAYNDYYQRMHTVGATCDFGGTATITSNDPSYRSC | |||
GH17 | 2 | 311 | 0 |
PSASEVVSIIKTHRITHVRLYDADSHMLKALADSGIEVTVGVTNEEVLGIGESASAAAAWVNKNVASYVPSTNITAIAVGSEVLTSIPHAAPILVTAMNN LHKALVASNLNFQVKVSSPQPLDIIPEPFPPCTAAFNSSPNSTVYQLLQFLNNTNSYFMLNAYPYYGYTNGNGIFPIDYALFKPLPSVKQIVDPNTLFHY NSMFDVMVDATYYSMDALNFSGIPIVVTETGWPWQGGPNEPDATVENAGTFINYLIRRVSNDSGPPSRPNIPINTYIYELFNEDKRPGPVSEKNWGVLYT NGTAVFPLSF |
Full Sequence |
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Protein Sequence Length: 459 Download |
MPSASEVVSI IKTHRITHVR LYDADSHMLK ALADSGIEVT VGVTNEEVLG IGESASAAAA 60 WVNKNVASYV PSTNITAIAV GSEVLTSIPH AAPILVTAMN NLHKALVASN LNFQVKVSSP 120 QPLDIIPEPF PPCTAAFNSS PNSTVYQLLQ FLNNTNSYFM LNAYPYYGYT NGNGIFPIDY 180 ALFKPLPSVK QIVDPNTLFH YNSMFDVMVD ATYYSMDALN FSGIPIVVTE TGWPWQGGPN 240 EPDATVENAG TFINYLIRRV SNDSGPPSRP NIPINTYIYE LFNEDKRPGP VSEKNWGVLY 300 TNGTAVFPLS FSGSSQIMGN ATTVFCVAKD DASEGKLQDG LNWACGQGQA NCSVIQSGQP 360 CYLPNNTKNH ASYAYNDYYQ RMHTVGATCD FGGTATITSN DPSYRSCIFT GSSNSSAREG 420 LLPPGAFGPV SPLGESMKLL VSKVRYVISA ACLLIILL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 2 | 302 | 311 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-20 | 326 | 396 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 325 | 409 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-79 | 2 | 311 | 310 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 1 | 434 | 1 | 435 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 1 | 412 | 37 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 434 | 37 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 1 | 431 | 37 | 467 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 1 | 458 | 1 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 311 | 12 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 1.96182e-44 | 1 | 312 | 13 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 1.96182e-44 | 1 | 312 | 13 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 1.96182e-44 | 1 | 312 | 13 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 1.96182e-44 | 1 | 312 | 13 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BG648951 | 263 | 21 | 283 | 0 |
DV150956 | 250 | 18 | 267 | 0 |
FY437361 | 274 | 142 | 412 | 0 |
DV161369 | 260 | 1 | 260 | 0 |
FG991977 | 291 | 154 | 442 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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