Basic Information | |
---|---|
Species | Picea abies |
Cazyme ID | MA_956526g0010 |
Family | PL1 |
Protein Properties | Length: 382 Molecular Weight: 42994.6 Isoelectric Point: 6.3837 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
PL1 | 157 | 358 | 0 |
PLWIIFESDMVIQLKEELLMNSFKTIDGRGADVHIAHGACITIQFVTNIIIHGVSIHDCIQTGNAMVRNSPEHYGWRTLADGDGISIFEGRYIWIDHCSL SNCNDGLIDAIMGSTAITISNNYFSHHNEVMLLGHNDSYVQDVIMQVTIAFNYFGEGLIQRMPRCRHGYFHVVNNHYAHWEMYAIGGSANPTINNEGNIF IA |
Full Sequence |
---|
Protein Sequence Length: 382 Download |
MSHQSQLRYL FLLAGIFCLQ ILALKCSAAK SQGMLDNVVG FLRGRPTIQA TQQKQNSSFS 60 VERPEEVVKM VQKSINDSRR QLTYLSCGTG NPIDDCWRCD PNWQMNRQRL ADCAIGFGRD 120 AIGGKNGRYY VVTDSSDDDA VNPKPGTLRY AVIQDEPLWI IFESDMVIQL KEELLMNSFK 180 TIDGRGADVH IAHGACITIQ FVTNIIIHGV SIHDCIQTGN AMVRNSPEHY GWRTLADGDG 240 ISIFEGRYIW IDHCSLSNCN DGLIDAIMGS TAITISNNYF SHHNEVMLLG HNDSYVQDVI 300 MQVTIAFNYF GEGLIQRMPR CRHGYFHVVN NHYAHWEMYA IGGSANPTIN NEGNIFIAPD 360 DANAKEVTKR LYAANEKWNQ WS |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3866 | PelB | 2.0e-27 | 123 | 356 | 252 | + Pectate lyase [Carbohydrate transport and metabolism] | ||
pfam00544 | Pec_lyase_C | 8.0e-65 | 171 | 356 | 208 | + Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. | ||
smart00656 | Amb_all | 2.0e-75 | 165 | 360 | 207 | + Amb_all domain. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABR18471.1 | 0 | 1 | 382 | 1 | 384 | unknown [Picea sitchensis] |
GenBank | ACU21247.1 | 0 | 57 | 382 | 22 | 349 | unknown [Glycine max] |
EMBL | CAE02420.2 | 0 | 60 | 381 | 91 | 414 | OSJNBa0095E20.8 [Oryza sativa (japonica cultivar-group)] |
GenBank | EEC76710.1 | 0 | 49 | 381 | 81 | 415 | hypothetical protein OsI_14719 [Oryza sativa Indica Group] |
GenBank | EEE60442.1 | 0 | 49 | 382 | 51 | 386 | hypothetical protein OsJ_13660 [Oryza sativa Japonica Group] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1pxz_B | 0 | 91 | 371 | 2 | 283 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 1pxz_A | 0 | 91 | 371 | 2 | 283 | A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen |
PDB | 3zsc_A | 4e-16 | 160 | 358 | 50 | 248 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1jta_A | 0.000000000006 | 169 | 356 | 78 | 287 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1jrg_B | 0.000000000006 | 169 | 356 | 78 | 287 | A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi |