Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000851m |
Family | CBM43 |
Protein Properties | Length: 567 Molecular Weight: 61053.8 Isoelectric Point: 5.282 |
Chromosome | Chromosome/Scaffold: 5 Start: 25998773 End: 26001025 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 454 | 4.1e-31 |
WCVANAAVGDDRLQAALDYACGHGADCSGIQPGAVCFEPSTLLAHASYAVNSYYQNKGRASGTCDFAGAAHVVLEEPA | |||
CBM43 | 463 | 544 | 5.4e-33 |
WCVANAAVGDGRLQAALDYACGHGADCGAIQPGGKCFEPNTRVAHASYAFNSYYQRNHRASGSCDFAGAASVVYMAPKIGNC | |||
GH17 | 28 | 363 | 0 |
GVSYGRVANDLPDPAKVTQLLKDNGITMVRIYDAKQEVLRSLANTGIKVMVMVPNENIAEAARNPSYALQWVRDRVKAYYPATQIHGVAVGNEVFDSRPD LTRQLVPAMTNVQAALAQLGLADAVKVSTPIAFTAVENTFPPSRGRFKDEIAEPVMKPMLQFLKRTGSYLTMNMYPFWAYYNQPQDINLDYALGNSNPGV PDDDTSLKYYNLLDAERDAAHSAMDHLVPGVSLYLTETNWPPRGRPHQGGGHRGGRRLEDDGDGVFTIANAQAYVNNLINRVLAGNTGTPLRPDAALDVY IFALFNENQKGDGPDDIEQNFGLFYPNMQKVYEFDF |
Full Sequence |
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Protein Sequence Length: 567 Download |
MALTRILVFV LGAALPFLLF HAEAGQMGVS YGRVANDLPD PAKVTQLLKD NGITMVRIYD 60 AKQEVLRSLA NTGIKVMVMV PNENIAEAAR NPSYALQWVR DRVKAYYPAT QIHGVAVGNE 120 VFDSRPDLTR QLVPAMTNVQ AALAQLGLAD AVKVSTPIAF TAVENTFPPS RGRFKDEIAE 180 PVMKPMLQFL KRTGSYLTMN MYPFWAYYNQ PQDINLDYAL GNSNPGVPDD DTSLKYYNLL 240 DAERDAAHSA MDHLVPGVSL YLTETNWPPR GRPHQGGGHR GGRRLEDDGD GVFTIANAQA 300 YVNNLINRVL AGNTGTPLRP DAALDVYIFA LFNENQKGDG PDDIEQNFGL FYPNMQKVYE 360 FDFHGGVAPP APPAASWCVA NAAVGDDRLQ AALDYACGHG ADCSGIQPGA VCFEPSTLLA 420 HASYAVNSYY QNKGRASGTC DFAGAAHVVL EEPAEICDPN ASWCVANAAV GDGRLQAALD 480 YACGHGADCG AIQPGGKCFE PNTRVAHASY AFNSYYQRNH RASGSCDFAG AASVVYMAPK 540 IGNCVLPWRA WIGETTSMSE GSFAAI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-25 | 376 | 447 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 2.0e-25 | 462 | 533 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-36 | 376 | 454 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 2.0e-39 | 462 | 545 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-88 | 28 | 363 | 337 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC82195.1 | 0 | 1 | 547 | 1 | 547 | hypothetical protein OsI_26335 [Oryza sativa Indica Group] |
RefSeq | NP_001151472.1 | 0 | 1 | 563 | 1 | 579 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | XP_002462968.1 | 0 | 22 | 564 | 24 | 580 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 25 | 539 | 23 | 564 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 371 | 550 | 482 | 661 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 363 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 363 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 363 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 363 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 363 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |