Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000908m |
Family | CBM43 |
Protein Properties | Length: 552 Molecular Weight: 59119.3 Isoelectric Point: 5.7591 |
Chromosome | Chromosome/Scaffold: 5 Start: 26178435 End: 26180666 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 464 | 545 | 1.1e-29 |
WCVANAAVGDGRLQAALNWACSNGADCSDTQPGAACFEPNTKVAHASHAFNSYYQRKHRASGTCDFAGAASVVYEEPRIGNC | |||
CBM43 | 379 | 457 | 2.2e-31 |
WCVANAAVGDSRLQAALDWACSHGADCGAIQPGASCFEPDTKLAHASYAFNSYYQRNNKASGSCDFAGAASVVYQEPSM | |||
GH17 | 29 | 365 | 0 |
VGVSYGRVANDLPDPAKVTQLLKDNGITMVRIYDAKQEVLRSLANTGIKVMVMVPNENIAEAARNPSYALQWVRDNVKAYYPATQIHGVAVGNEVFDSRP DLTRQLVPAMTNVQAALAQLGLADAVKVSTPIAFTAVENTFPPSRGRFKDEIAEPVMKPMLQFLKRTGSYLTMNMYPFWAYYNQPHDINLDYALGNSNPG VPDDDTSLKYYNLLDAERDAAHSAMDDLVPGVSLSLTETNWPPHGKPHHGGGHRGGRRLEDDGDGVFTIANAQAYVNNLINRVLTGNTGTPLRPNAPLDV YIFALFNENQKGDGPDDIEQNFGLFYPNMQKVYAFSF |
Full Sequence |
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Protein Sequence Length: 552 Download |
MALARFLVVL LGAALASLLL SSCADASEVG VSYGRVANDL PDPAKVTQLL KDNGITMVRI 60 YDAKQEVLRS LANTGIKVMV MVPNENIAEA ARNPSYALQW VRDNVKAYYP ATQIHGVAVG 120 NEVFDSRPDL TRQLVPAMTN VQAALAQLGL ADAVKVSTPI AFTAVENTFP PSRGRFKDEI 180 AEPVMKPMLQ FLKRTGSYLT MNMYPFWAYY NQPHDINLDY ALGNSNPGVP DDDTSLKYYN 240 LLDAERDAAH SAMDDLVPGV SLSLTETNWP PHGKPHHGGG HRGGRRLEDD GDGVFTIANA 300 QAYVNNLINR VLTGNTGTPL RPNAPLDVYI FALFNENQKG DGPDDIEQNF GLFYPNMQKV 360 YAFSFQGSGA PPGGQTASWC VANAAVGDSR LQAALDWACS HGADCGAIQP GASCFEPDTK 420 LAHASYAFNS YYQRNNKASG SCDFAGAASV VYQEPSMCSA KASWCVANAA VGDGRLQAAL 480 NWACSNGADC SDTQPGAACF EPNTKVAHAS HAFNSYYQRK HRASGTCDFA GAASVVYEEP 540 RIGNCALPSR A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-21 | 463 | 534 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 3.0e-25 | 378 | 449 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-34 | 463 | 545 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 2.0e-38 | 378 | 457 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-88 | 29 | 365 | 338 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001151472.1 | 0 | 1 | 551 | 1 | 566 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | XP_002462968.1 | 0 | 24 | 551 | 24 | 566 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 28 | 540 | 24 | 564 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 1e-34 | 377 | 457 | 572 | 652 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 378 | 551 | 487 | 661 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 365 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 365 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |