Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si000941m |
Family | CBM43 |
Protein Properties | Length: 542 Molecular Weight: 57858 Isoelectric Point: 4.7487 |
Chromosome | Chromosome/Scaffold: 5 Start: 26214990 End: 26217693 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 453 | 534 | 3.9e-31 |
WCVANASVGDAWLQSALEYACGHGADCSAIQPGAACFEPNTKVAHASYAFNSYYQYNGRANGTCDFNGAGSVVYQPQKIGNC | |||
CBM43 | 370 | 450 | 3e-32 |
WCVANAAVGDARLQAALDYACGNGADCDAIQPGETCFQPNTKVAHASYAFNSYYQNKGRAAGTCDFNGAASVVYQAPTDTC | |||
GH17 | 26 | 362 | 0 |
VGVSYGRVADNLPDPGSVVQLLQHNGITMVRIYDTNPQVLTSLANTGIKVMVMVPNENLADAARNPSYALEWVRTNVAAFLPATKIHGISVGNEVFKWRS DLNLQLVPAMTNVHDALVKLGLTDAVKVTTPVAFDALKDPTFPPSAGRFKDEIAQSVMKPMLQFLQKTSSYLTMNIYPFLAYANQQPGTISLDYALGNPN TGVSEVDAGPTYTSLLDAQLDATYYAMEGLGFPDVSLYVTESGWPSRGVIHRGGRRLLDTGDDGSEAASVANAQAYNDNLIKRVLSGKTGTPHRPDADMD VYIFALFNEDNKGSPDDVEAYFGLFDHNMKKVYEFSF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MALARFLLVL VLGATLLFSS AEAAGVGVSY GRVADNLPDP GSVVQLLQHN GITMVRIYDT 60 NPQVLTSLAN TGIKVMVMVP NENLADAARN PSYALEWVRT NVAAFLPATK IHGISVGNEV 120 FKWRSDLNLQ LVPAMTNVHD ALVKLGLTDA VKVTTPVAFD ALKDPTFPPS AGRFKDEIAQ 180 SVMKPMLQFL QKTSSYLTMN IYPFLAYANQ QPGTISLDYA LGNPNTGVSE VDAGPTYTSL 240 LDAQLDATYY AMEGLGFPDV SLYVTESGWP SRGVIHRGGR RLLDTGDDGS EAASVANAQA 300 YNDNLIKRVL SGKTGTPHRP DADMDVYIFA LFNEDNKGSP DDVEAYFGLF DHNMKKVYEF 360 SFQGAPAASW CVANAAVGDA RLQAALDYAC GNGADCDAIQ PGETCFQPNT KVAHASYAFN 420 SYYQNKGRAA GTCDFNGAAS VVYQAPTDTC WSWCVANASV GDAWLQSALE YACGHGADCS 480 AIQPGAACFE PNTKVAHASY AFNSYYQYNG RANGTCDFNG AGSVVYQPQK IGNCVLPPPN 540 A* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-24 | 452 | 523 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam07983 | X8 | 4.0e-26 | 369 | 440 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-36 | 452 | 535 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
smart00768 | X8 | 3.0e-38 | 369 | 450 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 26 | 362 | 337 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC82195.1 | 0 | 1 | 538 | 1 | 548 | hypothetical protein OsI_26335 [Oryza sativa Indica Group] |
RefSeq | NP_001151472.1 | 0 | 1 | 537 | 1 | 563 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | XP_002462968.1 | 0 | 18 | 537 | 21 | 563 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 26 | 534 | 25 | 568 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
RefSeq | XP_002462970.1 | 0 | 365 | 537 | 483 | 658 | hypothetical protein SORBIDRAFT_02g035520 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 362 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 26 | 362 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 26 | 362 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 26 | 362 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 26 | 362 | 2 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |