Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si029616m |
Family | CBM43 |
Protein Properties | Length: 495 Molecular Weight: 53191.3 Isoelectric Point: 7.5662 |
Chromosome | Chromosome/Scaffold: 2 Start: 42433123 End: 42434916 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 392 | 473 | 2.6e-32 |
WCVANAGVRDARLQAALDYACGHGADCSDIQPGAPCFEPNTVVAHASHAFNSYYQRNHRAKAACNFGGAASVVCHQPKIGNC | |||
GH17 | 28 | 384 | 0 |
VGVSYGRLGNDLLDTASVVKLLNKSGITTVRLYDANPTVLGALANTGIKVMVMLPNDDLAAAAADPSSALRWVLRNVAAHYPATRIHGVAVGNEVFEEAR SLTWQLVPAMANVHTALVKLRLDEAVKVSTPIAFTALEASWPPSAGRFRRDIARPVMKPMLDFLERTGSYLTINAYPFFAYLEQPDKISLDYALGSSMTG VRDPVTGLVYHSLLDAQLDATYFAMEKLGSSAGVRDEGNSSLGRGGRPRVRAYVSESGWASRGRRRPGRRLEADGDGAPAPAPAAAATIANAKAYNNYLI NRVLSGDTGTPYRPDVDMDVYIFALFNENQKGWGADDIERHFGLFYPNQTKVYEFDF |
Full Sequence |
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Protein Sequence Length: 495 Download |
MALTRLFVVL LGTALPLLFF SPADAGEVGV SYGRLGNDLL DTASVVKLLN KSGITTVRLY 60 DANPTVLGAL ANTGIKVMVM LPNDDLAAAA ADPSSALRWV LRNVAAHYPA TRIHGVAVGN 120 EVFEEARSLT WQLVPAMANV HTALVKLRLD EAVKVSTPIA FTALEASWPP SAGRFRRDIA 180 RPVMKPMLDF LERTGSYLTI NAYPFFAYLE QPDKISLDYA LGSSMTGVRD PVTGLVYHSL 240 LDAQLDATYF AMEKLGSSAG VRDEGNSSLG RGGRPRVRAY VSESGWASRG RRRPGRRLEA 300 DGDGAPAPAP AAAATIANAK AYNNYLINRV LSGDTGTPYR PDVDMDVYIF ALFNENQKGW 360 GADDIERHFG LFYPNQTKVY EFDFHGGALP SWCVANAGVR DARLQAALDY ACGHGADCSD 420 IQPGAPCFEP NTVVAHASHA FNSYYQRNHR AKAACNFGGA ASVVCHQPKI GNCVLPSKAW 480 IQETTAKSEG YAAI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-27 | 391 | 462 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-40 | 391 | 474 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-76 | 28 | 384 | 357 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001151472.1 | 0 | 1 | 480 | 1 | 478 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | NP_001151472.1 | 2e-37 | 391 | 491 | 477 | 579 | hydrolase, hydrolyzing O-glycosyl compounds [Zea mays] |
RefSeq | XP_002462967.1 | 0 | 1 | 494 | 1 | 500 | hypothetical protein SORBIDRAFT_02g035480 [Sorghum bicolor] |
RefSeq | XP_002462968.1 | 0 | 20 | 480 | 21 | 479 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
RefSeq | XP_002462968.1 | 3.00018e-42 | 391 | 494 | 478 | 581 | hypothetical protein SORBIDRAFT_02g035490 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 384 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 384 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 384 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 384 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 384 | 1 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |