Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035561m |
Family | CBM43 |
Protein Properties | Length: 465 Molecular Weight: 49376.7 Isoelectric Point: 5.6701 |
Chromosome | Chromosome/Scaffold: 9 Start: 52676024 End: 52677839 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 329 | 410 | 8.8e-31 |
CVAREGADPKMLQAALDWACGPGKVDCSALMQGQPCYDPDNVEAHATYAFNAYYHGMGMGSGTCYFSGVAVITTTDPSHGSC | |||
GH17 | 4 | 310 | 0 |
VPAATQITTLLRSQNIRHVRLYDADPAMLAALANTGIRVIVSVPNEQLLAIGNSNATAANWVARNVAAHFPSVNITAIAVGSEVLSAQPNAAPLLMPAMR YLQNALVAAALDRYIKISTPHSSSIILDSFPPLLQPVTGQCARAHAQFLQSTGSPLMLNVYPYYDYMRSNGVIPLDYALFRPLPPNKEAVDANTLLHYTN VFDAVVDAAYFAMAYLNVTNVPVMVTETGWPHKGDPSSEPDATSDNADTYNSNLIRHVMNSTGTPKHPGVAVPTYIYELYDEDTRPGSTSEKYWGLFDMN GVPAYTL |
Full Sequence |
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Protein Sequence Length: 465 Download |
MSSVPAATQI TTLLRSQNIR HVRLYDADPA MLAALANTGI RVIVSVPNEQ LLAIGNSNAT 60 AANWVARNVA AHFPSVNITA IAVGSEVLSA QPNAAPLLMP AMRYLQNALV AAALDRYIKI 120 STPHSSSIIL DSFPPLLQPV TGQCARAHAQ FLQSTGSPLM LNVYPYYDYM RSNGVIPLDY 180 ALFRPLPPNK EAVDANTLLH YTNVFDAVVD AAYFAMAYLN VTNVPVMVTE TGWPHKGDPS 240 SEPDATSDNA DTYNSNLIRH VMNSTGTPKH PGVAVPTYIY ELYDEDTRPG STSEKYWGLF 300 DMNGVPAYTL HLTGSGVLLA NDTTNQTYCV AREGADPKML QAALDWACGP GKVDCSALMQ 360 GQPCYDPDNV EAHATYAFNA YYHGMGMGSG TCYFSGVAVI TTTDPSHGSC VYSGKNGSAL 420 LNGTSLAPSS NSTDGSSGVH RGIGDVSSVA RVVSTALLLS LLLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 222 | 300 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-19 | 327 | 399 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-39 | 327 | 412 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-73 | 5 | 310 | 309 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF80565.1 | 0 | 1 | 456 | 1 | 459 | unknown [Zea mays] |
GenBank | ACN30650.1 | 0 | 1 | 453 | 34 | 489 | unknown [Zea mays] |
RefSeq | NP_001130376.1 | 0 | 1 | 456 | 34 | 492 | hypothetical protein LOC100191471 [Zea mays] |
RefSeq | NP_001150141.1 | 0 | 1 | 453 | 34 | 489 | glucan endo-1,3-beta-glucosidase 3 [Zea mays] |
RefSeq | XP_002468258.1 | 0 | 1 | 456 | 34 | 492 | hypothetical protein SORBIDRAFT_01g042560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 2 | 313 | 12 | 315 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
PDB | 3ur8_A | 0 | 2 | 313 | 12 | 315 | A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A |
PDB | 3ur7_B | 0 | 2 | 313 | 12 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 2 | 313 | 12 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 2cyg_A | 0 | 2 | 312 | 10 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO453799 | 269 | 155 | 423 | 0 |
DV023702 | 270 | 24 | 290 | 0 |
GE476981 | 315 | 64 | 375 | 0 |
EE022197 | 244 | 79 | 319 | 0 |
DY535781 | 219 | 227 | 445 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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