Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si035572m |
Family | CBM43 |
Protein Properties | Length: 464 Molecular Weight: 46419 Isoelectric Point: 5.101 |
Chromosome | Chromosome/Scaffold: 9 Start: 45269770 End: 45275284 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 248 | 329 | 4.5e-30 |
CVALQNADPAALQAGLNWACGSGHADCSAIQPGGPCYSQNNLPALASYAYNDYYQKMSSTGATCSFNGTATTTNNDPSSGSC | |||
GH17 | 28 | 178 | 2.3e-30 |
ENSPSEFAKIVQSKQTKQARVCGADPELLRSLAGSDAEVMLTIPNEQLEHIAEFPEEADLWIITYVARFLPAARITHVVAGDDVLTNSPGDAYFLVPAML NLRSALAAAGLDGRVKVSSAVSAETLTAPAWSGVAGHVLRFLSSAGAPLFL |
Full Sequence |
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Protein Sequence Length: 464 Download |
MLQKRWQGCV FWLAFLLCSA SGIMIPSENS PSEFAKIVQS KQTKQARVCG ADPELLRSLA 60 GSDAEVMLTI PNEQLEHIAE FPEEADLWII TYVARFLPAA RITHVVAGDD VLTNSPGDAY 120 FLVPAMLNLR SALAAAGLDG RVKVSSAVSA ETLTAPAWSG VAGHVLRFLS SAGAPLFLKS 180 PSSEASDAKA DAAYGAMRAL GVPGVPVIAA DLGATGGVEA APYYYYSYPG GKSSERGKRR 240 SLATGTFCVA LQNADPAALQ AGLNWACGSG HADCSAIQPG GPCYSQNNLP ALASYAYNDY 300 YQKMSSTGAT CSFNGTATTT NNDPSSGSCV FAGSSTAGGS NSSTPVGASP PTSLAPPTGF 360 TPPVGSSPPS SDFSPPAVGT TPPSGFAPPA GGGFAPPAGG GFAPPDGGFG TPPGFGPPGS 420 FNGSGSFGPS GTLNPYGGAR GAMSSGAGLT ALSAVAVAVL LVP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-20 | 246 | 318 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-21 | 30 | 178 | 160 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 3.0e-36 | 246 | 331 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 31 | 356 | 4 | 430 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
GenBank | EEC75349.1 | 0 | 1 | 333 | 2 | 352 | hypothetical protein OsI_11774 [Oryza sativa Indica Group] |
RefSeq | NP_001050214.1 | 0 | 1 | 439 | 2 | 451 | Os03g0374600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_187965.1 | 0 | 1 | 356 | 1 | 466 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002467792.1 | 0 | 25 | 450 | 1 | 410 | hypothetical protein SORBIDRAFT_01g034190 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0.00000000000001 | 31 | 179 | 15 | 172 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2jon_A | 0.000000000001 | 243 | 331 | 9 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_D | 0.000000000002 | 32 | 177 | 17 | 174 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_C | 0.000000000002 | 32 | 177 | 17 | 174 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_B | 0.000000000002 | 32 | 177 | 17 | 174 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |