| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.013G223000.1 |
| Family | GH35 |
| Protein Properties | Length: 737 Molecular Weight: 83136.2 Isoelectric Point: 6.4003 |
| Chromosome | Chromosome/Scaffold: 13 Start: 54319345 End: 54323363 |
| Description | beta-galactosidase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 33 | 116 | 1.3e-39 |
| IIDGNHRIVLSGSIHYPRSTAQMWPDLIRKAKEGGLDAVETYVFWNAHEPTRRQYDFSGNLDLIRFLKTIQDQGLYAILRIGPY | |||
| GH35 | 124 | 295 | 0 |
| EKLFASQGGNIILAQVENEYGNVMEPYGDEGKSYINWCAQMADSLDIGVPWIMCQQAAPPKPMLETCNGWYCDEYKPKDPNTPKLWTENWTGWFKSWGGA DPFRTAEDLAYSVARFFQKGGTLQNYYMYHGGTNFGRTSGGPYITTTYDYNAPLDEYGNLNQPKWGHLKQLH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 737 Download |
| MNIFNLLFTA FIFSFILFHS NALNVTHDSR SIIIDGNHRI VLSGSIHYPR STAQMWPDLI 60 RKAKEGGLDA VETYVFWNAH EPTRRQYDFS GNLDLIRFLK TIQDQGLYAI LRIGPYTFDM 120 VKKEKLFASQ GGNIILAQVE NEYGNVMEPY GDEGKSYINW CAQMADSLDI GVPWIMCQQA 180 APPKPMLETC NGWYCDEYKP KDPNTPKLWT ENWTGWFKSW GGADPFRTAE DLAYSVARFF 240 QKGGTLQNYY MYHGGTNFGR TSGGPYITTT YDYNAPLDEY GNLNQPKWGH LKQLHDVLHS 300 IEYILTNGDV KNEKLSNLVM VSAQTSLMVK KLNKAEDEPS SLKWMWRPEL IESTSVQGRG 360 DVSVNKIVDQ KDMANDASDY LWYMTSINVA KDDPMLNGTV TLRVNDTGHV LHAFFNGEYI 420 GSQWSKYGNN NVTYVFERNI NLSLGKNLIS LLSVTVGFKN YGPMFDLVGA GITSPIELVL 480 NKNVVKDLSS NKWTYKVGLN GISNKFFDID CASKSSSKWV SDPIPIYRNF TWYKTTFKAP 540 LGNKPVVVDL LGLGKGMAWV NGHSLGRYWP SYIADKQLCK TETCDYRGRY SDSKCVSKCG 600 EPTQRWYHVP RSFLKDSENT LVLFEEFGGN PSGVQFQTVE IGSVCINTHE GKEVELSCQD 660 RPISKIKFAS FGSPQGVCGS FDKSEFDSEV DALSILEREC LGKESCSFKI TEEKFGRPSC 720 EVKKLAVEAV CEDFTL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 2.0e-5 | 47 | 112 | 67 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 4.0e-14 | 656 | 731 | 80 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-16 | 25 | 288 | 356 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-120 | 31 | 295 | 317 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 3 | 731 | 849 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAJ09953.1 | 0 | 2 | 731 | 6 | 827 | beta-galactosidase [Mangifera indica] |
| EMBL | CBI27773.1 | 0 | 10 | 731 | 23 | 835 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002297749.1 | 0 | 6 | 731 | 7 | 823 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516237.1 | 0 | 7 | 731 | 6 | 825 | beta-galactosidase, putative [Ricinus communis] |
| RefSeq | XP_002516256.1 | 0 | 10 | 731 | 33 | 848 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8e-39 | 31 | 569 | 14 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 1e-33 | 34 | 628 | 12 | 573 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 1e-33 | 34 | 628 | 12 | 573 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8c_B | 1e-33 | 34 | 628 | 12 | 573 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| PDB | 4e8c_A | 1e-33 | 34 | 628 | 12 | 573 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
