Basic Information | |
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Species | Aquilegia coerulea |
Cazyme ID | Aquca_019_00045.1 |
Family | GH28 |
Protein Properties | Length: 400 Molecular Weight: 43711.4 Isoelectric Point: 9.3783 |
Chromosome | Chromosome/Scaffold: 19 Start: 923764 End: 925943 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH28 | 55 | 385 | 0 |
QRACTWKGGAMVRIPSGNYYVGRPTSFVGPCKGKIQFEIKGLLKAPTGISGFSDTWIKFRYVNGLIVYGGGTLDGQGHSAWKYNDCHKNTNCRNLPANLR FDFVTDAIIDRIHSLDSKSLHINLFACRNVNLKSITITAPAESPNTDGIHIGDSSFINILHSKIGTGDDCISLSPGSENIYVYGVTCGPGHGISVGSLGQ RKNEESVLGLVVKNCTFIGTDNGVRIKTWAPSEPGLVRNLTFDHIFMDRVLNPVVIDQQYCPYQSCAHKSPSRVRIQDVHYRNIWGTSASKTAVNFVCSK SVPCKYVELKNINLLYHGKDGKASANCSNLD |
Full Sequence |
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Protein Sequence Length: 400 Download |
MKKSSLILLQ WVCVIFLLAF VVSAKSNIKI FNVKKFGAVA NGKTDCSKAL LNAWQRACTW 60 KGGAMVRIPS GNYYVGRPTS FVGPCKGKIQ FEIKGLLKAP TGISGFSDTW IKFRYVNGLI 120 VYGGGTLDGQ GHSAWKYNDC HKNTNCRNLP ANLRFDFVTD AIIDRIHSLD SKSLHINLFA 180 CRNVNLKSIT ITAPAESPNT DGIHIGDSSF INILHSKIGT GDDCISLSPG SENIYVYGVT 240 CGPGHGISVG SLGQRKNEES VLGLVVKNCT FIGTDNGVRI KTWAPSEPGL VRNLTFDHIF 300 MDRVLNPVVI DQQYCPYQSC AHKSPSRVRI QDVHYRNIWG TSASKTAVNF VCSKSVPCKY 360 VELKNINLLY HGKDGKASAN CSNLDGFAAV QMIPPCYCR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02155 | PLN02155 | 2.0e-87 | 17 | 398 | 385 | + polygalacturonase | ||
PLN02793 | PLN02793 | 3.0e-88 | 29 | 395 | 373 | + Probable polygalacturonase | ||
PLN02218 | PLN02218 | 4.0e-89 | 14 | 396 | 389 | + polygalacturonase ADPG | ||
pfam00295 | Glyco_hydro_28 | 1.0e-102 | 66 | 383 | 318 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. | ||
PLN02188 | PLN02188 | 4.0e-132 | 6 | 396 | 401 | + polygalacturonase/glycoside hydrolase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0004650 | polygalacturonase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA89476.1 | 0 | 19 | 384 | 20 | 380 | polygalacturonase [Salix gilgiana] |
DDBJ | BAA89477.1 | 0 | 19 | 384 | 20 | 380 | polygalacturonase [Salix gilgiana] |
Swiss-Prot | Q6H9K0 | 0 | 25 | 398 | 4 | 376 | PGLR2_PLAAC RecName: Full=Exopolygalacturonase; AltName: Full=Pollen allergen Pla a 2; AltName: Allergen=Pla a 2; Flags: Precursor |
RefSeq | XP_002273801.1 | 0 | 14 | 396 | 13 | 395 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002329175.1 | 0 | 14 | 384 | 15 | 380 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ib4_B | 0.000000000000002 | 124 | 384 | 81 | 333 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 1ib4_A | 0.000000000000002 | 124 | 384 | 81 | 333 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 1ia5_A | 0.000000000000002 | 124 | 384 | 81 | 333 | A Chain A, Polygalacturonase From Aspergillus Aculeatus |
PDB | 1czf_B | 0.000000000000005 | 199 | 389 | 178 | 361 | A Chain A, Endo-Polygalacturonase Ii From Aspergillus Niger |
PDB | 1czf_A | 0.000000000000005 | 199 | 389 | 178 | 361 | A Chain A, Endo-Polygalacturonase Ii From Aspergillus Niger |