| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra028660 |
| Family | GH27 |
| Protein Properties | Length: 417 Molecular Weight: 46753.9 Isoelectric Point: 8.0673 |
| Chromosome | Chromosome/Scaffold: 02 Start: 2654547 End: 2656807 |
| Description | alpha-galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH27 | 52 | 153 | 1.7e-32 |
| LANGLSVTPPMGWNSWNHFNCIINETVIKETADALVTTGLSRHGYNYVNIDDCWAELSRDKKGKLVPKKSTFPSGIKALADYVHSKGLKLGIYSDAGYLT CS | |||
| GH27 | 155 | 346 | 0 |
| TMPGSLGYEEKDAKTFAEWGIDYLKYDNCNTDGTRPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGAPLGNSWRTTNDINDSWLSMISIADMNEIY AAHARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDIRNMTKETMEIVANKEVIALNQDPHGVQAKKARMEGDIQVWAGPLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 417 Download |
| MARRERSEMV NMSILMMMMM MMMSSTLMTT VYSSRPVQRA SDDFDILRRH LLANGLSVTP 60 PMGWNSWNHF NCIINETVIK ETADALVTTG LSRHGYNYVN IDDCWAELSR DKKGKLVPKK 120 STFPSGIKAL ADYVHSKGLK LGIYSDAGYL TCSKTMPGSL GYEEKDAKTF AEWGIDYLKY 180 DNCNTDGTRP TVRYPVMTRA LMKSGRPIFH SLCEWGDMHP ALWGAPLGNS WRTTNDINDS 240 WLSMISIADM NEIYAAHARP GGWNDPDMLE VGNGGMTKDE YIVHFSIWAI SKAPLLLGCD 300 IRNMTKETME IVANKEVIAL NQDPHGVQAK KARMEGDIQV WAGPLSGYRV ALLLLNRGPK 360 RSDITAFWDD IEIPPNSIVE ARDLWKHKTL KQKFVGNLTA TVDSHACKLY VLKPVA* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02899 | PLN02899 | 3.0e-22 | 55 | 321 | 353 | + alpha-galactosidase | ||
| PLN03231 | PLN03231 | 1.0e-25 | 60 | 326 | 353 | + putative alpha-galactosidase; Provisional | ||
| PLN02692 | PLN02692 | 0 | 31 | 416 | 388 | + alpha-galactosidase | ||
| PLN02808 | PLN02808 | 0 | 39 | 414 | 376 | + alpha-galactosidase | ||
| PLN02229 | PLN02229 | 0 | 52 | 415 | 367 | + alpha-galactosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM13199.1 | 0 | 1 | 416 | 1 | 410 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
| GenBank | ABC55266.1 | 0 | 1 | 416 | 1 | 413 | acid alpha galactosidase 1 [Cucumis sativus] |
| RefSeq | NP_196455.1 | 0 | 1 | 416 | 1 | 410 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002316426.1 | 0 | 48 | 416 | 1 | 369 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513158.1 | 0 | 45 | 416 | 41 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uas_A | 0 | 52 | 414 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
| PDB | 3a5v_A | 0 | 54 | 409 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktc_A | 0 | 52 | 416 | 1 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
| PDB | 1ktb_A | 0 | 52 | 416 | 1 | 388 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| PDB | 3s5z_B | 0 | 52 | 365 | 1 | 337 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
| ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
| ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
| melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
| stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
