y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.011G207400.2 |
Family | GH27 |
Protein Properties | Length: 411 Molecular Weight: 45312.7 Isoelectric Point: 6.615 |
Chromosome | Chromosome/Scaffold: 11 Start: 49909025 End: 49915284 |
Description | Melibiase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 162 | 228 | 9.7e-21 |
GAFTCQVRPGSLFHETGDAQLFADWGVDYLKYDNCFNLGIDPKKRYPPMRDALNATGRTIFYSICEC | |||
GH27 | 237 | 341 | 1.7e-29 |
DKWASRAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALMKAPLLIGCDVRNMTAETLEILSNKEVISVNQDSLGVQGRKVYVSGEANCLQVWAGPLSGN RLVVA | |||
GH27 | 64 | 170 | 1.7e-33 |
FQLNNGLAVTPQMGWNSWNFFACSISEDLIKETADALVSTGLADLGYVYVNIDDCWSAATRNLKGQLVPDPKTFPSGIKALSDYVHGKGLKLGIYGDAGA FTCQVRP |
Full Sequence |
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Protein Sequence Length: 411 Download |
MGMENMKKKK SVYSVYIVMV LTLRLIDGGI EGRQVGVLEK LEKPSSGFSK SYNSIYDTSK 60 YGIFQLNNGL AVTPQMGWNS WNFFACSISE DLIKETADAL VSTGLADLGY VYVNIDDCWS 120 AATRNLKGQL VPDPKTFPSG IKALSDYVHG KGLKLGIYGD AGAFTCQVRP GSLFHETGDA 180 QLFADWGVDY LKYDNCFNLG IDPKKRYPPM RDALNATGRT IFYSICECMT TIADINDKWA 240 SRAGPGGWND PDMLEVGNGG MTYQEYRAHF SIWALMKAPL LIGCDVRNMT AETLEILSNK 300 EVISVNQDSL GVQGRKVYVS GEANCLQVWA GPLSGNRLVV AFWNRCLKAA TITARWEVLG 360 LESSTNVSIR DLWQHKEVKE NAVASFGAKV DSHDCHMYIF TPKTVAHSES * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 2.0e-21 | 74 | 311 | 356 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 5.0e-26 | 47 | 255 | 258 | + Melibiase. | ||
PLN02692 | PLN02692 | 1.0e-155 | 66 | 402 | 366 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 3.0e-170 | 66 | 403 | 367 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 21 | 408 | 416 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU86897.1 | 0 | 6 | 402 | 1 | 424 | glycosyl hydrolase family-like protein [Salvia miltiorrhiza] |
EMBL | CAB87430.1 | 0 | 6 | 409 | 1 | 433 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191190.2 | 0 | 6 | 409 | 4 | 436 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002279730.1 | 0 | 14 | 408 | 5 | 425 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325481.1 | 0 | 51 | 402 | 1 | 380 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 66 | 402 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 67 | 378 | 2 | 369 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 66 | 405 | 1 | 389 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 66 | 405 | 1 | 389 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 4do6_B | 0 | 66 | 344 | 1 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES791126 | 332 | 25 | 328 | 0 |
HO780204 | 339 | 97 | 407 | 0 |
HO804702 | 307 | 130 | 408 | 0 |
CO096715 | 252 | 47 | 270 | 0 |
EX415077 | 294 | 81 | 346 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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