| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g065150.1 |
| Family | GH127 |
| Protein Properties | Length: 618 Molecular Weight: 68566.2 Isoelectric Point: 5.8871 |
| Chromosome | Chromosome/Scaffold: 4 Start: 20738087 End: 20742235 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH127 | 95 | 374 | 6.8e-23 |
| EVTGDPLYREIGSFFMDIVNSSHSYATGGTSVREFWSNPKRIADNLGTTENEESCTTYNMLKVSRHLFRWTKEVTYADYYERALTNGVLGIQRGTDPGVM IYMLPLGIGVSKAKTGHSWGNPFDTFWCCYGTGIESFSKLGDSIYFEEEGNSPSLYIIQYISSSFNWKSGKTLLTQTVVPAASSDPYLRVTFTFSSNEKT GTSSTLNFRVPSWSHADGAKAILNSEALSLPAPGNFLSITRQWSAGDKLTLQLPLIIRTEAIKDDRPEYASVQAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 618 Download |
| MVTWMVDYFY DRVVNVISKY TVNRHYQSLN EETGGMNDVL YKLYSVTGDS KHLLLAHLFD 60 KPCFLGLLAV QANDIADFHA NTHIPIVVGS QMRYEVTGDP LYREIGSFFM DIVNSSHSYA 120 TGGTSVREFW SNPKRIADNL GTTENEESCT TYNMLKVSRH LFRWTKEVTY ADYYERALTN 180 GVLGIQRGTD PGVMIYMLPL GIGVSKAKTG HSWGNPFDTF WCCYGTGIES FSKLGDSIYF 240 EEEGNSPSLY IIQYISSSFN WKSGKTLLTQ TVVPAASSDP YLRVTFTFSS NEKTGTSSTL 300 NFRVPSWSHA DGAKAILNSE ALSLPAPGNF LSITRQWSAG DKLTLQLPLI IRTEAIKDDR 360 PEYASVQAIL YGPYLLAGHT TRNWDIKADT NKAVADWITP IPSSYNSQLV SFSQDFDQST 420 FVITNSNQSL TMQKSPEPGT DVALQATFRL ILKGAVSKTV MLEPIDLPGM IVSHQEPDQP 480 LIVVDSSLGG PSSVFLVVPG LDGRNQTISL QSQSNKDCYV YSDMSSGSGV KLRCKSDSEA 540 SFNQAASFVS GKGLRQYHPI SFVAKGGNQN FLLEPLFNFR DEHYTVYFNI QELLAADAVV 600 VSSWHGGDRY PMSGLWW* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG3533 | COG3533 | 4.0e-52 | 32 | 378 | 349 | + Uncharacterized protein conserved in bacteria [Function unknown] |
| pfam07944 | DUF1680 | 8.0e-108 | 1 | 377 | 383 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16424.1 | 0 | 1 | 591 | 127 | 732 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 1 | 591 | 334 | 939 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 1 | 592 | 259 | 864 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 1 | 591 | 254 | 857 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 1 | 591 | 254 | 857 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781092 | 408 | 176 | 572 | 0 |
| GO843439 | 352 | 46 | 397 | 0 |
| JK989006 | 319 | 86 | 403 | 0 |
| GR445393 | 269 | 22 | 290 | 0 |
| HO781092 | 26 | 567 | 592 | 0.1 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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