| Basic Information | |
|---|---|
| Species | Setaria italica |
| Cazyme ID | Si016279m |
| Family | GH127 |
| Protein Properties | Length: 883 Molecular Weight: 97232.7 Isoelectric Point: 6.5697 |
| Chromosome | Chromosome/Scaffold: 1 Start: 4829966 End: 4834984 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH127 | 371 | 656 | 1e-23 |
| GAQMRYEVTGDPLYKQIATFFMDTINSSHSYATGGTSAGEFWTDPKHLAETLSTENEESCTTYNMLKISRNLFRWTKEISYADYYERALINGVLSIQRGT DPGVMIYMLPQAPGHSKAVSYHGWGTKYDSFWCCYGTGIESFSKLGDSIYFEEKEDTPALNIIQYIPSTFNWKAAGLTVTQQIKTLSSSDLYLQISLSIS AETTSQSAKLNVRIPSWTFADGAGANLNGKDLGSLSPGSFLSVTKQWNSEDHLSLRFPIRLRTEAIKDDRPEYASLQAILFGPFVL | |||
| Full Sequence |
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| Protein Sequence Length: 883 Download |
| MARGPGMPAA AALGAVVILA AAAGWHGAEG KSCTNAFPGL TSHTERAATQ LRSAPRAPVP 60 ERSHHGRHTH EHGHEQHLTP TDESAWMSLM PRRALRREEA FDWLMLYRKL RGATAGAPRP 120 GVAAGAFLSE ASLHDVRLEP GSPYWQAQQT NLEYLLLLDV DRLVWSFRKQ AGLTAPGTPY 180 GGWEGPNVQL RGHFVGHYLS ATAKMWASTH NDTLNVKMSS VVDALYDCQK KMGTGYLSAF 240 PSEFFDWVEA IRPVWAPYYT IHKIMQGLLD QYTVAGNSKA LDMVVKMANY FSDRVKNVIQ 300 KYSIERHWES LNEETGGMND VLYQLYTITN DLKHLTLAHL FDKPCFLGLL AVQADSISGF 360 HSNTHIPVVI GAQMRYEVTG DPLYKQIATF FMDTINSSHS YATGGTSAGE FWTDPKHLAE 420 TLSTENEESC TTYNMLKISR NLFRWTKEIS YADYYERALI NGVLSIQRGT DPGVMIYMLP 480 QAPGHSKAVS YHGWGTKYDS FWCCYGTGIE SFSKLGDSIY FEEKEDTPAL NIIQYIPSTF 540 NWKAAGLTVT QQIKTLSSSD LYLQISLSIS AETTSQSAKL NVRIPSWTFA DGAGANLNGK 600 DLGSLSPGSF LSVTKQWNSE DHLSLRFPIR LRTEAIKDDR PEYASLQAIL FGPFVLAGLS 660 TGDWDAKVGN SSTISDWITT VPSVYNSQLA TFTQVSNGKT FVLSSANGSL TMQERPEVDG 720 TDIAIHATFR AHPQDSTELH DTYSTTMKGA SVLIEPFDLP GTVITNNLTL SAQKGSDSLF 780 NIIPGLDGNP NSVSLELGTK PGCFLVTGVD YSAETKIQVS CKSSLQSIGG ILEQAASFVQ 840 TAPLRQYHPI SFIAKGVRRN FILEPLYSLR DEFYTVYFNI GG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 4.0e-65 | 133 | 658 | 535 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 1.0e-156 | 135 | 657 | 531 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL52954.1 | 0 | 27 | 880 | 27 | 877 | unknown [Zea mays] |
| GenBank | EAY84862.1 | 0 | 31 | 882 | 26 | 891 | hypothetical protein OsI_06226 [Oryza sativa Indica Group] |
| RefSeq | NP_001046185.1 | 0 | 31 | 882 | 26 | 891 | Os02g0195500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001145969.1 | 0 | 27 | 880 | 27 | 877 | hypothetical protein LOC100279496 [Zea mays] |
| RefSeq | XP_002451716.1 | 0 | 26 | 882 | 28 | 888 | hypothetical protein SORBIDRAFT_04g006520 [Sorghum bicolor] |
