Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00020382m |
Family | GH27 |
Protein Properties | Length: 273 Molecular Weight: 29816.7 Isoelectric Point: 7.3645 |
Chromosome | Chromosome/Scaffold: 0145400 Start: 366 End: 2239 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 32 | 134 | 1.9e-26 |
TRRAALENGLGRTPQMGWNHFHCKINEKIIREIADAMVDKGLAKLGYEYINIDDCWAAYDRDSQGNLAANASTFPSGIPALADYVHGKGLKLGIYGDAGS RTC | |||
GH27 | 136 | 233 | 8e-27 |
KLMPGSLGYEDKDAKIYASWGVDYLKYDNCNNQGVSPQLRYNTMNKALLNSGRNIFSLCEWGVDDPATWAGGVGNSWRTTGDIKDTWASMTAIADKNN |
Full Sequence |
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Protein Sequence Length: 273 Download |
MAGKAPLCAF FLLLLSTSAM AIRPTRSVVA TTRRAALENG LGRTPQMGWN HFHCKINEKI 60 IREIADAMVD KGLAKLGYEY INIDDCWAAY DRDSQGNLAA NASTFPSGIP ALADYVHGKG 120 LKLGIYGDAG SRTCSKLMPG SLGYEDKDAK IYASWGVDYL KYDNCNNQGV SPQLRYNTMN 180 KALLNSGRNI FSLCEWGVDD PATWAGGVGN SWRTTGDIKD TWASMTAIAD KNNKWASYAG 240 PGGWNDPDML EVGNGGMTTE EYRSHFSIWA LVK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 2.0e-12 | 45 | 273 | 319 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 4.0e-20 | 42 | 273 | 303 | + Melibiase. | ||
PLN02692 | PLN02692 | 4.0e-127 | 1 | 273 | 288 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 1.0e-132 | 34 | 273 | 244 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 9.0e-153 | 14 | 273 | 264 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI47559.1 | 0 | 7 | 273 | 28 | 298 | alpha galactosidase [Coffea arabica] |
EMBL | CAI47560.1 | 0 | 32 | 273 | 11 | 256 | alpha-galactosidase [Coffea canephora] |
Swiss-Prot | Q42656 | 0 | 32 | 273 | 11 | 256 | AGAL_COFAR RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
RefSeq | XP_002314831.1 | 0 | 33 | 273 | 20 | 264 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525666.1 | 0 | 8 | 273 | 21 | 291 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 37 | 273 | 1 | 241 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 39 | 273 | 3 | 265 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 37 | 272 | 1 | 260 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 37 | 272 | 1 | 260 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 37 | 272 | 1 | 259 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |