Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00020784m |
Family | GH27 |
Protein Properties | Length: 401 Molecular Weight: 43177.5 Isoelectric Point: 5.2368 |
Chromosome | Chromosome/Scaffold: 014089 Start: 7516 End: 10411 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 32 | 137 | 1.1e-30 |
ARRAALENGLGRTPQMGWNSWNHFHCKINEEIIREIADAMVDNGLAKLGYEYINIDDCWAAYDRDSQGNLAANASTFPSGIPALANYVHGKGLKLGIYGD AGSRTC | |||
GH27 | 139 | 334 | 0 |
KLMPGSLGYEDKDAKTFASWGVDYLKYDNCNNQGISPQLRYNTMSKALLNSGRNIFFSLCEWGVDDPGTWAGGVGNSWRTTGDIKDTWASMTAIADKNDK WASYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALVKAPLLIGCDIRSMSKETKEILSNENVIAVNQADELGVQGHKVQQDGDQEVWAGPLSGG |
Full Sequence |
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Protein Sequence Length: 401 Download |
MAGKAPLCAF FLLLLSTSAA AIRPARSVAA TARRAALENG LGRTPQMGWN SWNHFHCKIN 60 EEIIREIADA MVDNGLAKLG YEYINIDDCW AAYDRDSQGN LAANASTFPS GIPALANYVH 120 GKGLKLGIYG DAGSRTCSKL MPGSLGYEDK DAKTFASWGV DYLKYDNCNN QGISPQLRYN 180 TMSKALLNSG RNIFFSLCEW GVDDPGTWAG GVGNSWRTTG DIKDTWASMT AIADKNDKWA 240 SYAGPGGWND PDMLEVGNGG MTTEEYRSHF SIWALVKAPL LIGCDIRSMS KETKEILSNE 300 NVIAVNQADE LGVQGHKVQQ DGDQEVWAGP LSGGKIAIVL WNRGSTKASI TASWSSIGLN 360 ASTVADAHDL WTDGVISSVQ GELNETVDSH ACKMYVVTPK * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 9.0e-25 | 45 | 306 | 348 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 2.0e-26 | 42 | 283 | 309 | + Melibiase. | ||
PLN02808 | PLN02808 | 0 | 37 | 400 | 364 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 37 | 399 | 367 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 37 | 399 | 364 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA73964.1 | 0 | 1 | 400 | 16 | 425 | alpha-galactosidase [Phaseolus vulgaris] |
DDBJ | BAC66445.1 | 0 | 36 | 400 | 65 | 428 | alpha-galactosidase [Helianthus annuus] |
RefSeq | XP_002314831.1 | 0 | 14 | 400 | 1 | 386 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331416.1 | 0 | 34 | 400 | 2 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525666.1 | 0 | 8 | 399 | 21 | 413 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 37 | 399 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 39 | 394 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 37 | 400 | 1 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 37 | 400 | 1 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 37 | 358 | 1 | 342 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |