Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00032797m |
Family | GH27 |
Protein Properties | Length: 275 Molecular Weight: 29994.7 Isoelectric Point: 4.8856 |
Chromosome | Chromosome/Scaffold: 0127076 Start: 49 End: 3056 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 33 | 138 | 3.5e-28 |
RRTALENGLGQAPQMGWNSWNHFACNINEDIIRQIADAMVDSGLAKLGYYYINIDDCWAAYDRLPGGNLVANPSTFPSGIKVLADYVHGKGLKLGVYGDA GSRTCS | |||
GH27 | 140 | 238 | 1.1e-31 |
KMPGSLGYEEQDAKTFASWGVDYLKYDNCNVQGLSPQPRYINMSKALLNSGRDIFFSLCEWGMNDPATWASGVGNSWRTTGDIQDNWASMTAIADANDK |
Full Sequence |
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Protein Sequence Length: 275 Download |
MEEKAPFRAL LLLLLSTWVV AIRPERSAVA VVRRTALENG LGQAPQMGWN SWNHFACNIN 60 EDIIRQIADA MVDSGLAKLG YYYINIDDCW AAYDRLPGGN LVANPSTFPS GIKVLADYVH 120 GKGLKLGVYG DAGSRTCSNK MPGSLGYEEQ DAKTFASWGV DYLKYDNCNV QGLSPQPRYI 180 NMSKALLNSG RDIFFSLCEW GMNDPATWAS GVGNSWRTTG DIQDNWASMT AIADANDKSA 240 SYAGPGGWND PDMLDVGNGG QQRSTAPISA YGLWR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 5.0e-15 | 45 | 275 | 305 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 1.0e-26 | 42 | 221 | 235 | + Melibiase. | ||
PLN02229 | PLN02229 | 1.0e-116 | 34 | 260 | 227 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 1.0e-118 | 31 | 263 | 233 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 5.0e-141 | 25 | 260 | 236 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAA73964.1 | 0 | 1 | 260 | 27 | 286 | alpha-galactosidase [Phaseolus vulgaris] |
EMBL | CAI47559.1 | 0 | 3 | 274 | 16 | 294 | alpha galactosidase [Coffea arabica] |
RefSeq | NP_001031855.1 | 0 | 32 | 274 | 1 | 242 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | NP_568193.1 | 0 | 13 | 274 | 8 | 268 | AtAGAL2 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 2); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
Swiss-Prot | Q42656 | 0 | 32 | 274 | 11 | 252 | AGAL_COFAR RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 37 | 274 | 1 | 237 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 39 | 274 | 3 | 261 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 37 | 260 | 1 | 244 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 37 | 260 | 1 | 244 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 37 | 260 | 1 | 243 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |