Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00035760m |
Family | GH27 |
Protein Properties | Length: 397 Molecular Weight: 43883.3 Isoelectric Point: 8.1354 |
Chromosome | Chromosome/Scaffold: 090436 Start: 252 End: 3923 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 239 | 315 | 5.7e-25 |
SYAGPGGWNDPDMLEVGNGGMSEAEYRSHFSIWALAKAPLLIGCDVRSMSQQTKDILSNWEVIAVNQDSLGVQGKKV | |||
GH27 | 137 | 235 | 9.8e-27 |
QKMPGSLDHEEQDVKTFSSWGIDYLKYDNCNDAGRSVMERYTKMSNAMKTYGKNIFFSLCEWGRENPATWAGSMGNSWRTTDDIADNWGSMTSRADQND |
Full Sequence |
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Protein Sequence Length: 397 Download |
CGRSSVVQLV RPYFRVQTDL IKKKHLQSSG LWFQHKCEQC VSAVPTSTKK ALGIPNLLKL 60 LHFYSADALV NTGLAKLGYE YVNIDDCWAE SDRDYQGNFV ANRQTFPSGI KALADYVHAK 120 GLKLGIYSDA GTRTCSQKMP GSLDHEEQDV KTFSSWGIDY LKYDNCNDAG RSVMERYTKM 180 SNAMKTYGKN IFFSLCEWGR ENPATWAGSM GNSWRTTDDI ADNWGSMTSR ADQNDRWASY 240 AGPGGWNDPD MLEVGNGGMS EAEYRSHFSI WALAKAPLLI GCDVRSMSQQ TKDILSNWEV 300 IAVNQDSLGV QGKKVQSNNG LEVWAGPLSN NRKAVVLWNR QGYQATITAQ WSSIGLASST 360 AVTARDLWAH SSFSAQGQLS ASVAPHDCKM YVLTPK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 2.0e-18 | 69 | 309 | 326 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 1.0e-20 | 75 | 306 | 305 | + Melibiase. | ||
PLN02692 | PLN02692 | 5.0e-165 | 65 | 395 | 333 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 2.0e-171 | 65 | 395 | 336 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 65 | 396 | 333 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1UAS | 0 | 62 | 395 | 18 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
GenBank | ACF80887.1 | 0 | 56 | 395 | 87 | 422 | unknown [Zea mays] |
RefSeq | NP_001142381.1 | 0 | 56 | 395 | 87 | 422 | hypothetical protein LOC100274554 [Zea mays] |
Swiss-Prot | Q9FXT4 | 0 | 62 | 395 | 73 | 416 | AGAL_ORYSJ RecName: Full=Alpha-galactosidase; AltName: Full=Alpha-D-galactoside galactohydrolase; AltName: Full=Melibiase; Flags: Precursor |
RefSeq | XP_002467020.1 | 0 | 56 | 395 | 90 | 425 | hypothetical protein SORBIDRAFT_01g018400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 62 | 395 | 18 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 1ktc_A | 0 | 59 | 396 | 35 | 387 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 1ktb_A | 0 | 59 | 396 | 35 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3a5v_A | 0 | 56 | 390 | 22 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1t0o_A | 0 | 65 | 396 | 34 | 413 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH194075 | 311 | 87 | 397 | 0 |
JG955138 | 284 | 65 | 348 | 0 |
GT034265 | 318 | 62 | 369 | 0 |
EB670133 | 272 | 97 | 368 | 0 |
FL919009 | 259 | 75 | 333 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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