Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G038100.1 |
Family | GH27 |
Protein Properties | Length: 409 Molecular Weight: 45624 Isoelectric Point: 9.0536 |
Chromosome | Chromosome/Scaffold: 04 Start: 2903339 End: 2907074 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 41 | 146 | 9.6e-33 |
TQFLLANGVARTPPMGWNSWNHFQCNIDERTIKTTADALVSTGLAALGYKYVNIDDCWGEEKRDWKGSLRAKASTFPSGIKALADYVHSKGLKLGIYSDA GYRTCS | |||
GH27 | 148 | 322 | 0 |
KMPGSLGHEEQDAKTFAEWGVDYLKYDNCYHDGSKPQDRYARMSYALRKVGRPILYSLCEWGQEYPAKWAGFYGNAWRTTGDIKDTWESVISIADENNIW GRYAGPGRWNDPDMLEVGNGGMSLEEYRSHFSIWALMKAPLLIGCDVQSASHETLRILGNKEVIDVNQDPLGVQG |
Full Sequence |
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Protein Sequence Length: 409 Download |
MKMGSKFSFL FVNVVLVVAS INKGVNCMNV SSSNANLEDY TQFLLANGVA RTPPMGWNSW 60 NHFQCNIDER TIKTTADALV STGLAALGYK YVNIDDCWGE EKRDWKGSLR AKASTFPSGI 120 KALADYVHSK GLKLGIYSDA GYRTCSKKMP GSLGHEEQDA KTFAEWGVDY LKYDNCYHDG 180 SKPQDRYARM SYALRKVGRP ILYSLCEWGQ EYPAKWAGFY GNAWRTTGDI KDTWESVISI 240 ADENNIWGRY AGPGRWNDPD MLEVGNGGMS LEEYRSHFSI WALMKAPLLI GCDVQSASHE 300 TLRILGNKEV IDVNQDPLGV QGRKIRAKAG LEIWAGSLSR KRVAVVLWNR SGSRAPITVG 360 WREIGLSPYN PVIVRDLWAH SFVSMRKLHG LTAYVASHAC KMYILTPS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 4.0e-26 | 22 | 291 | 341 | + Melibiase. | ||
PLN03231 | PLN03231 | 1.0e-26 | 53 | 319 | 353 | + putative alpha-galactosidase; Provisional | ||
PLN02808 | PLN02808 | 0 | 44 | 407 | 364 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 31 | 408 | 382 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 40 | 407 | 371 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24922.1 | 0 | 42 | 407 | 28 | 393 | unknown [Picea sitchensis] |
EMBL | CBI38328.1 | 0 | 3 | 407 | 1 | 403 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271908.1 | 0 | 3 | 407 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305678.1 | 0 | 28 | 408 | 1 | 379 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519009.1 | 0 | 12 | 407 | 5 | 402 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 45 | 408 | 1 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 47 | 402 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 45 | 407 | 1 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 45 | 407 | 1 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 45 | 356 | 1 | 331 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |