Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.004G038100.2 |
Family | GH27 |
Protein Properties | Length: 405 Molecular Weight: 45045.3 Isoelectric Point: 8.7989 |
Chromosome | Chromosome/Scaffold: 04 Start: 2903481 End: 2906949 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH27 | 239 | 318 | 3.7e-24 |
ENNIWGRYAGPGRWNDPDMLEVGNGGMSLEEYRSHFSIWALMKAPLLIGCDVQSASHETLRILGNKEVIDVNQDPLGVQG | |||
GH27 | 145 | 239 | 1.6e-31 |
MPGSLGHEEQDAKTFAEWGVDYLKYDNCYHDGSKPQDRYARMSYALRKVGRPILYSLCEWGQEYPAKWAGFYGNAWRTTGDIKDTWESVISIADE | |||
GH27 | 39 | 142 | 5.7e-33 |
TQFLLANGVARTPPMGWNSWNHFQCNIDERTIKTTADALVSTGLAALGYKYVNIDDCWGEEKRDWKGSLRAKASTFPSGIKALADYVHSKGLKLGIYSDA GTCS |
Full Sequence |
---|
Protein Sequence Length: 405 Download |
MGSKFSFLFV NVVLVVASIN KGVNCMNVSS SNANLEDYTQ FLLANGVART PPMGWNSWNH 60 FQCNIDERTI KTTADALVST GLAALGYKYV NIDDCWGEEK RDWKGSLRAK ASTFPSGIKA 120 LADYVHSKGL KLGIYSDAGT CSKKMPGSLG HEEQDAKTFA EWGVDYLKYD NCYHDGSKPQ 180 DRYARMSYAL RKVGRPILYS LCEWGQEYPA KWAGFYGNAW RTTGDIKDTW ESVISIADEN 240 NIWGRYAGPG RWNDPDMLEV GNGGMSLEEY RSHFSIWALM KAPLLIGCDV QSASHETLRI 300 LGNKEVIDVN QDPLGVQGRK IRAKAGLEIW AGSLSRKRVA VVLWNRSGSR APITVGWREI 360 GLSPYNPVIV RDLWAHSFVS MRKLHGLTAY VASHACKMYI LTPS* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 6.0e-26 | 51 | 315 | 353 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 4.0e-26 | 20 | 287 | 341 | + Melibiase. | ||
PLN02808 | PLN02808 | 0 | 42 | 403 | 364 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 29 | 404 | 382 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 38 | 403 | 371 | + alpha-galactosidase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK24922.1 | 0 | 40 | 403 | 28 | 393 | unknown [Picea sitchensis] |
EMBL | CBI38328.1 | 0 | 1 | 403 | 1 | 403 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271908.1 | 0 | 1 | 403 | 1 | 403 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305678.1 | 0 | 26 | 404 | 1 | 379 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519009.1 | 0 | 10 | 403 | 5 | 402 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 43 | 404 | 1 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 45 | 398 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 43 | 403 | 1 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 43 | 403 | 1 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 43 | 352 | 1 | 331 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |