Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.004G038100.3 |
Family | GH27 |
Protein Properties | Length: 385 Molecular Weight: 42938.8 Isoelectric Point: 8.5917 |
Chromosome | Chromosome/Scaffold: 04 Start: 2903481 End: 2906949 |
Description | alpha-galactosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 39 | 144 | 8.6e-33 |
TQFLLANGVARTPPMGWNSWNHFQCNIDERTIKTTADALVSTGLAALGYKYVNIDDCWGEEKRDWKGSLRAKASTFPSGIKALADYVHSKGLKLGIYSDA GYRTCS | |||
GH27 | 146 | 320 | 0 |
KMPGSLGHEEQDAKTFAEWGVDYLKYDNCYHDGSKPQDRYARMSYALRKVGRPILYSLCEWGQEYPAKWAGFYGNAWRTTGDIKDTWESVISIADENNIW GRYAGPGRWNDPDMLEVGNGGMSLEEYRSHFSIWALMKAPLLIGCDVQSASHETLRILGNKEVIDVNQDPLGVQG |
Full Sequence |
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Protein Sequence Length: 385 Download |
MGSKFSFLFV NVVLVVASIN KGVNCMNVSS SNANLEDYTQ FLLANGVART PPMGWNSWNH 60 FQCNIDERTI KTTADALVST GLAALGYKYV NIDDCWGEEK RDWKGSLRAK ASTFPSGIKA 120 LADYVHSKGL KLGIYSDAGY RTCSKKMPGS LGHEEQDAKT FAEWGVDYLK YDNCYHDGSK 180 PQDRYARMSY ALRKVGRPIL YSLCEWGQEY PAKWAGFYGN AWRTTGDIKD TWESVISIAD 240 ENNIWGRYAG PGRWNDPDML EVGNGGMSLE EYRSHFSIWA LMKAPLLIGC DVQSASHETL 300 RILGNKEVID VNQDPLGVQG RKIRAKAGLE IWAGSLSRKR VAVVLWNRSG SRAPITVGWR 360 EIGLSPYNPV IVRDLWAMYI LTPS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 4.0e-26 | 20 | 289 | 338 | + Melibiase. | ||
PLN03231 | PLN03231 | 2.0e-26 | 51 | 317 | 353 | + putative alpha-galactosidase; Provisional | ||
PLN02229 | PLN02229 | 6.0e-178 | 38 | 376 | 342 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 42 | 383 | 363 | + alpha-galactosidase | ||
PLN02692 | PLN02692 | 0 | 29 | 376 | 352 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81856.1 | 0 | 1 | 382 | 1 | 340 | hypothetical protein [Vitis vinifera] |
EMBL | CBI38328.1 | 0 | 1 | 384 | 1 | 382 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271908.1 | 0 | 1 | 384 | 1 | 382 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305678.1 | 0 | 26 | 384 | 1 | 379 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519009.1 | 0 | 10 | 382 | 5 | 379 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 43 | 384 | 1 | 362 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 45 | 376 | 3 | 364 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 43 | 348 | 1 | 327 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 43 | 348 | 1 | 327 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 43 | 354 | 1 | 331 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |