Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G255200.1 |
Family | GH27 |
Protein Properties | Length: 427 Molecular Weight: 47034.6 Isoelectric Point: 7.1969 |
Chromosome | Chromosome/Scaffold: 10 Start: 22534295 End: 22538305 |
Description | alpha-galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 165 | 262 | 1.9e-32 |
TMPGSLGHEEQDAKSFASWGIDYLKYDNCNNDGTKPTVRYPVMTRALMKTGHPIFFSLCEWGDMHPATWGAKVGNSWRTTNDISDTWDSMVSRADMNE | |||
GH27 | 56 | 163 | 7.4e-34 |
SSRRNLLANGLADTPPMGWNSWNHFNCKIDEKIIKATADFLVSTGLSKLGYTYVNIDDCWAEMARDGKGNLVPKKSTFPSGIKALADYVHSKGLKLGIYS DAGYFTCS |
Full Sequence |
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Protein Sequence Length: 427 Download |
MMENCANGSS NCLLAVCLLL LISSSPSSSI RGSPGVTSVD SVSRVEKNRL PSNWDSSRRN 60 LLANGLADTP PMGWNSWNHF NCKIDEKIIK ATADFLVSTG LSKLGYTYVN IDDCWAEMAR 120 DGKGNLVPKK STFPSGIKAL ADYVHSKGLK LGIYSDAGYF TCSKTMPGSL GHEEQDAKSF 180 ASWGIDYLKY DNCNNDGTKP TVRYPVMTRA LMKTGHPIFF SLCEWGDMHP ATWGAKVGNS 240 WRTTNDISDT WDSMVSRADM NEVYAELARP GGWNDPDMLE VGNGGMTKDE YTLHFSIWAI 300 SKAPLLLGCD VRNMTKETMD IIANKEVIAV NQDPLGVQAK KVRMEGDLEI WAGPLAGYRV 360 AVLLVNRGPW RNSISAQWDD IGIPLNSIVK ARDLWEHKTL KTHFVGNLTA TMDSHACKMY 420 ILKPIS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02065 | Melibiase | 9.0e-23 | 57 | 308 | 336 | + Melibiase. | ||
PLN03231 | PLN03231 | 9.0e-25 | 70 | 336 | 353 | + putative alpha-galactosidase; Provisional | ||
PLN02692 | PLN02692 | 0 | 37 | 426 | 390 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 57 | 424 | 368 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 62 | 426 | 368 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC55266.1 | 0 | 37 | 426 | 26 | 413 | acid alpha galactosidase 1 [Cucumis sativus] |
RefSeq | NP_196455.1 | 0 | 18 | 426 | 13 | 410 | AtAGAL1 (Arabidopsis thaliana ALPHA-GALACTOSIDASE 1); alpha-galactosidase/ catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002270791.1 | 0 | 54 | 426 | 36 | 408 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316426.1 | 0 | 58 | 426 | 1 | 369 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513158.1 | 0 | 30 | 426 | 21 | 412 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 62 | 424 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 64 | 419 | 3 | 387 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 62 | 424 | 1 | 386 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 62 | 424 | 1 | 386 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3s5z_B | 0 | 62 | 367 | 1 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
ajugose biosynthesis II (galactinol-independent) | RXN-8285 | EC-2.4.1 | ajugose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8286 | EC-2.4.1 | verbascose synthase |
ajugose biosynthesis II (galactinol-independent) | RXN-8287 | EC-2.4.1 | stachyose synthase |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |