Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.019G056700.2 |
Family | GH27 |
Protein Properties | Length: 421 Molecular Weight: 46622.9 Isoelectric Point: 5.101 |
Chromosome | Chromosome/Scaffold: 19 Start: 8836366 End: 8843173 |
Description | Melibiase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 264 | 369 | 3.7e-30 |
DKWASYAGPGGWNDPDMLEVGNGGMTYHEYRAHFSIWALMKAPLLIGCDVRNMTAETIEILTNKEIIAVNQDPLGIQGRKVYSTGTDGCLQVWAGPLSGH RIVVAL | |||
GH27 | 160 | 261 | 1.6e-32 |
AGAFTCQVRPGSLLHEKDDAELFASWGVDYLKYDNCFNLGINPKERYPPMRDALNSTGRTVFYSLCEWGVDDPALWAGKVGNSWRTTDDINDSWASMTTT AD | |||
GH27 | 58 | 167 | 1.7e-36 |
SNYGIFQLNNGLARTPQMGWNSWNFFACNINETVIKETADALISTGLAELGYVYVNIDDCWSSTKRDSKGQLIPDPKTFPSGIKALADYVHEKGLKLGIY SDAGAFTCQV |
Full Sequence |
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Protein Sequence Length: 421 Download |
MRLMGKKITC YFELFLLGSS LSWVLKVAFA GSIAPLLQGY EEGSYGYSRS FNNVFSTSNY 60 GIFQLNNGLA RTPQMGWNSW NFFACNINET VIKETADALI STGLAELGYV YVNIDDCWSS 120 TKRDSKGQLI PDPKTFPSGI KALADYVHEK GLKLGIYSDA GAFTCQVRPG SLLHEKDDAE 180 LFASWGVDYL KYDNCFNLGI NPKERYPPMR DALNSTGRTV FYSLCEWGVD DPALWAGKVG 240 NSWRTTDDIN DSWASMTTTA DLNDKWASYA GPGGWNDPDM LEVGNGGMTY HEYRAHFSIW 300 ALMKAPLLIG CDVRNMTAET IEILTNKEII AVNQDPLGIQ GRKVYSTGTD GCLQVWAGPL 360 SGHRIVVALW NRCSKAATIT AGWGALGLES STSVSVRDLW QISWEMQWRH LVPESMLMIA 420 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 8.0e-26 | 73 | 338 | 352 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 3.0e-30 | 71 | 310 | 316 | + Melibiase. | ||
PLN02692 | PLN02692 | 1.0e-170 | 48 | 401 | 358 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 7 | 401 | 395 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 65 | 410 | 347 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU86897.1 | 0 | 46 | 401 | 41 | 396 | glycosyl hydrolase family-like protein [Salvia miltiorrhiza] |
EMBL | CAB87430.1 | 0 | 20 | 401 | 17 | 398 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191190.2 | 0 | 1 | 401 | 1 | 401 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002279730.1 | 0 | 7 | 401 | 3 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325481.1 | 0 | 50 | 401 | 1 | 352 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 65 | 403 | 1 | 337 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 66 | 401 | 2 | 365 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 65 | 400 | 1 | 356 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 65 | 400 | 1 | 356 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 60 | 371 | 17 | 361 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
melibiose degradation | ALPHAGALACTOSID-RXN | EC-3.2.1.22 | α-galactosidase |
stachyose degradation | RXN-11501 | EC-3.2.1.22 | α-galactosidase |