Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna21333.1-v1.0-hybrid |
Family | GH27 |
Protein Properties | Length: 432 Molecular Weight: 47717.1 Isoelectric Point: 4.7331 |
Chromosome | Chromosome/Scaffold: 7 Start: 18114178 End: 18118292 |
Description | Melibiase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 56 | 162 | 1.9e-34 |
LQLNNGLAQMPQMGWNSWNFFACDINETVIKETADALISTGLADLGYVYVNIDDCWSIPIRNSEGQLVPDPKTFPSGIKALADYIHGKGLKLGIYSDAGV FTCQVRP | |||
GH27 | 153 | 358 | 0 |
AGVFTCQVRPGSLYHESDDAKLFASWDVDYLKYDNCYNLGIPPKERYPPMREALNTSGRTIFYSVCEWGVDDPALWAGKVGNSWRTTDDINDSWASMTTI ADLNDKWASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNMTAETYEILSNEEVIAVNQDSLGVQGRKVNVSGTDGVYQVWAGP LSGHRL |
Full Sequence |
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Protein Sequence Length: 432 Download |
MAMSKIITFS VILCLSAMAI AVAGRVVGPL LQFQDKPSFL RPTFSRIFDT SMYGTLQLNN 60 GLAQMPQMGW NSWNFFACDI NETVIKETAD ALISTGLADL GYVYVNIDDC WSIPIRNSEG 120 QLVPDPKTFP SGIKALADYI HGKGLKLGIY SDAGVFTCQV RPGSLYHESD DAKLFASWDV 180 DYLKYDNCYN LGIPPKERYP PMREALNTSG RTIFYSVCEW GVDDPALWAG KVGNSWRTTD 240 DINDSWASMT TIADLNDKWA SYAGPGGWND PDMLEVGNGG MSYQEYRAHF SIWALMKAPL 300 LIGCDVRNMT AETYEILSNE EVIAVNQDSL GVQGRKVNVS GTDGVYQVWA GPLSGHRLAV 360 ALWNRGSTAK TITVKWEELG LQSSISVSVR DLWQHKLVTD NAVSSFGALV EAHDCHLYLF 420 TPQTESLRNV F* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 9.0e-26 | 66 | 331 | 352 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 4.0e-29 | 64 | 332 | 346 | + Melibiase. | ||
PLN02692 | PLN02692 | 1.0e-175 | 1 | 422 | 426 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 9 | 430 | 422 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 58 | 423 | 367 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 58 | 422 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 59 | 426 | 2 | 396 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 58 | 399 | 1 | 362 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 58 | 399 | 1 | 362 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3lrl_A | 0 | 52 | 405 | 16 | 407 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |