| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 28179.m000474 |
| Family | GT5 |
| Protein Properties | Length: 720 Molecular Weight: 81416.7 Isoelectric Point: 7.5347 |
| Chromosome | Chromosome/Scaffold: 28179 Start: 156061 End: 172776 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 208 | 660 | 0 |
| HIVHICTEMAPVTEVGYLASYVTGLSLALQKKGHLVEVILPKYASLNLSEIHGLQEIQAESYSYFNGQLHGNKIWTGVVNGIGVTFIQPLYYSSFFNREK IYGYTDDFERFSYFSRASLDFLTKSGKQPDVLHIHNWETAIVGPLFWDVFAKQGLEGTRILLTCHSLDSQCLEKPDMLALCGLDPGRLHRPNRLQDNAKT QFVNILKGGIVYSNKVVIVSSIHSKSRFIQDLSHGLGPTLSIHQDKLLVTPYGFDKSTWDPSKDRFLPENYSKDDMKGKTVCRVALQQYVGLSNNTSVVL VGCILSELSDFNVDSLKAVVWNATRNNVQFIFMGSKMLSANRALESLQKELKSENVRFISKYKEVLSHLIFAGSDIILCLSFHDPFLQVPLKALKYGAAP VAVTPNENRVRDLVDQDQETNKLSKFIRSTYENMSLSEALDEIVSISTDDEEQ | |||
| Full Sequence |
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| Protein Sequence Length: 720 Download |
| MITRNNKGDN SLLYTLPLLT LRLFYCHPGY HYHGTTTLSS PPSSLFRHRH HLSNTTTTTN 60 ASASTVTAHP NHHPHHYLVN HQYHTTVEIT TIASSTNSHH HNPALVTVAA ATIAPRVESH 120 DNVKMSQENF LPSSSESEAK HKDIWQLFKE AQQNILYLNK QRLLTVEELN KANQEKELLL 180 DKIEQLEAEK QAVLEKVMIN VNYMSSLHIV HICTEMAPVT EVGYLASYVT GLSLALQKKG 240 HLVEVILPKY ASLNLSEIHG LQEIQAESYS YFNGQLHGNK IWTGVVNGIG VTFIQPLYYS 300 SFFNREKIYG YTDDFERFSY FSRASLDFLT KSGKQPDVLH IHNWETAIVG PLFWDVFAKQ 360 GLEGTRILLT CHSLDSQCLE KPDMLALCGL DPGRLHRPNR LQDNAKTQFV NILKGGIVYS 420 NKVVIVSSIH SKSRFIQDLS HGLGPTLSIH QDKLLVTPYG FDKSTWDPSK DRFLPENYSK 480 DDMKGKTVCR VALQQYVGLS NNTSVVLVGC ILSELSDFNV DSLKAVVWNA TRNNVQFIFM 540 GSKMLSANRA LESLQKELKS ENVRFISKYK EVLSHLIFAG SDIILCLSFH DPFLQVPLKA 600 LKYGAAPVAV TPNENRVRDL VDQDQETNKL SKFIRSTYEN MSLSEALDEI VSISTDDEEQ 660 PIKMEAKDSK WFRANSFHLH SPMLPLHEGN LFQLCRVPKH DAARLSNKQL ESSHVRPCLV 720 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 9.0e-5 | 94 | 187 | 94 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 1.0e-68 | 207 | 609 | 419 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-75 | 208 | 609 | 423 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 4.0e-76 | 207 | 659 | 463 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 2.0e-104 | 205 | 609 | 412 | + transferase, transferring glycosyl groups | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13788.1 | 0 | 205 | 671 | 193 | 659 | starch synthase V precursor [Solanum tuberosum] |
| GenBank | ACD13789.1 | 0 | 117 | 680 | 52 | 672 | starch synthase V precursor [Vitis vinifera] |
| RefSeq | XP_002310316.1 | 0 | 141 | 671 | 64 | 651 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528907.1 | 0 | 1 | 720 | 1 | 720 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 2e-20 | 207 | 608 | 1 | 394 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2r4u_A | 2e-20 | 207 | 608 | 1 | 394 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2r4t_A | 2e-20 | 207 | 608 | 1 | 394 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2qzs_A | 2e-20 | 207 | 608 | 1 | 394 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3cx4_A | 5e-20 | 207 | 608 | 1 | 394 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY766100 | 286 | 218 | 503 | 0 |
| EL455989 | 315 | 177 | 491 | 0 |
| DV455772 | 265 | 358 | 622 | 0 |
| GR192508 | 269 | 288 | 555 | 0 |
| FE692410 | 288 | 289 | 575 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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