Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g45130.1 |
Family | GT5 |
Protein Properties | Length: 832 Molecular Weight: 90707.9 Isoelectric Point: 8.1634 |
Chromosome | Chromosome/Scaffold: 1 Start: 43331584 End: 43336657 |
Description | starch synthase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 357 | 824 | 0 |
GLGDVAGALPKALARRGHRVMVVVPRYGDYQEAYDLGIRKYYKAAGQDLEVNYFHAYIDGVDFVFIDAPLFRHRQGDIYGGSRQEIMKRMILFCKAAVEV PWHVPCGGVPYGDGNLVFIANDWHTALLPVYLKAYYRDHGLMQYTRSVLVIHNIAHQGRGPVDEFPFTDLPEHYLEHFKLYDPVGGEHANYFAAGLKMAD QVVAVSRGYLWELKTVEGGWGLHDIIRQNDWKINGIVNGIDNKEWNPEVDVHLQSDGYTNYSLRTLDAGKRQCKASLQRELGLQVRDDVPLIGFIGRLDG QKGVEIIGDAMPWIVSQDVQLVMLGTGRSDLEQMLQHFEWQHKDKVRGWVGFSVPMAHRITAGVDVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRD TVSPFDPFGDSGLGWTFDRAEAHKLIEALGHCLDTYRNYRESWRGLQQRGMSQDFSWDHAAQLYEDVL |
Full Sequence |
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Protein Sequence Length: 832 Download |
MLSAVASPAS FLALASASRR QPRVSTAPPL HAGANRCLAL HHWPPPQRTA RDGAVVRAEA 60 GAAGKKDARG DDAAPAAARQ PRLRRGGAAG KVAKRRDPAV RPVDRYGSGD AAGTAHQSPP 120 TPRQDAPQPR VPILNGVLVS GEDKSIVTAP PTKIVKVPTP DSGAILTARN KAAESIVLVK 180 KTPPPSGSNF ASSVSAPRSN TASNVELVEK KGAEIAKEAP KPKSSVSAPR SDIVGHVEPA 240 EKKGADIVKE ASKLKTPVTA PRSDTVNNLE PAEKKGADIV KEAPKPKTLP PPAAPTVQEA 300 AWDFKKYIGF EESAEVKDNG LAAADGAGSF EDHQNNHSGP LAGENVMNVI VVAAEWGLGD 360 VAGALPKALA RRGHRVMVVV PRYGDYQEAY DLGIRKYYKA AGQDLEVNYF HAYIDGVDFV 420 FIDAPLFRHR QGDIYGGSRQ EIMKRMILFC KAAVEVPWHV PCGGVPYGDG NLVFIANDWH 480 TALLPVYLKA YYRDHGLMQY TRSVLVIHNI AHQGRGPVDE FPFTDLPEHY LEHFKLYDPV 540 GGEHANYFAA GLKMADQVVA VSRGYLWELK TVEGGWGLHD IIRQNDWKIN GIVNGIDNKE 600 WNPEVDVHLQ SDGYTNYSLR TLDAGKRQCK ASLQRELGLQ VRDDVPLIGF IGRLDGQKGV 660 EIIGDAMPWI VSQDVQLVML GTGRSDLEQM LQHFEWQHKD KVRGWVGFSV PMAHRITAGV 720 DVLVMPSRFE PCGLNQLYAM AYGTVPVVHA VGGLRDTVSP FDPFGDSGLG WTFDRAEAHK 780 LIEALGHCLD TYRNYRESWR GLQQRGMSQD FSWDHAAQLY EDVLVKAKYQ W* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 3.0e-76 | 357 | 820 | 478 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 5.0e-130 | 347 | 822 | 490 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-154 | 347 | 824 | 496 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 0 | 347 | 827 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 348 | 824 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN28308.1 | 0 | 29 | 831 | 32 | 799 | starch synthase II [Aegilops tauschii] |
GenBank | AAN28309.1 | 0 | 1 | 831 | 1 | 802 | starch synthase II [Hordeum vulgare subsp. vulgare] |
DDBJ | BAE48800.1 | 0 | 29 | 831 | 32 | 799 | starch synthase II-D [Triticum aestivum] |
EMBL | CAB96626.1 | 0 | 28 | 831 | 31 | 799 | starch synthase IIa-2 [Triticum aestivum] |
EMBL | CAB96627.1 | 0 | 18 | 831 | 22 | 798 | starch synthase IIa-3 [Triticum aestivum] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 347 | 825 | 10 | 509 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3vue_A | 0 | 347 | 825 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 347 | 828 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 347 | 830 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 347 | 830 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781048 | 395 | 438 | 832 | 0 |
HO445868 | 438 | 395 | 832 | 0 |
HO390058 | 462 | 375 | 832 | 0 |
HO411612 | 417 | 417 | 832 | 0 |
HO781048 | 41 | 399 | 439 | 4.6 |
Sequence Alignments (This image is cropped. Click for full image.) |
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