| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre12.g521700.t1.2 |
| Family | GT5 |
| Protein Properties | Length: 1190 Molecular Weight: 122722 Isoelectric Point: 7.1728 |
| Chromosome | Chromosome/Scaffold: 12 Start: 4481108 End: 4489086 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 542 | 1016 | 0 |
| VFVTAEAAPWSKTGGLGDVMGALPRSLAARGHRVMVVSPRYLAPSAAKRYEGIKDTGVRARLNLNPPGAKADGGGGVHEVGFYHLHKDGVDWVFVDHISY HREGTPYGNAAGTYGDNLFRFSLLCMAACEAPLLLHVGGHRYGTPPGLPYGQNVTFIANDWHAGLVPVYVAAKYRRHGVYREARCVLALHNLAHQGAHPP RTFNSLGLPGEWYGALEWVDTGDNGAGGGGGGGGGPGGGARRHMQRVPTINIMKAAMVTSDKLVTVSPAYAWEVCDDKGEQGMGLTSLLRQRMGDLQGIV NGIDVGEWDPRTDPYIPRNYHEGSLGGKGLCKAALQGELGLPVDPAAPLLGFIGRLDFQKGPDLVLGVLRPLVAAGCQVVLLGSGAADYEEAFKAAQAAF PANVRAHVGFSVPLSHKILAASDILLMPSRFEPCGLNQMYAMRYGTVPVAHGTGGLRDTIDDVNPFRGEGFSRAG | |||
| Full Sequence |
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| Protein Sequence Length: 1190 Download |
| MRLTQKVPCS AIQPSVGSCP RGCGRRAVQR LNPCFSWQQR ASPSASEQAE QGPSVNGGSP 60 RSASPSSGRA LNAEEDFLAR ARKMQQRIAK LKKLQEKISQ MKEERDFMAA YNEVEASASD 120 NDDDDDSAGS NSSPEELRRW VASLMAASAE RVAAAAAAKA AAGGEGSRTS GTTSTSGVVN 180 GAGAMASWRQ GGGGGGGGVY MPASPSFDVP PATLPTPPPP AQPLVANPPA GAAAAASAPG 240 GYVPGRIVPQ HPAATAGPTA AAAAAASTSA APPAPGQQPV IRRYSVRYNS AANKPTFVPV 300 DGAAGASTNT GSGGGGVAAP QQQQQQQQQP DLSASPWRFR TPALQPVSAA MAPPQAPPQA 360 PPQAPAPPPP PPSPPPTQEP VRFQSILAQA AAPAAAPAPP AADTAAPPGA RPAAPAPATS 420 ASASSASAAA AAGTAAAAAA PGAPAAAAAA AKKGGAAAVP AKPAAPVRDP DAELRATAFP 480 ESLTSTNPYT LYDMPLPSRP MPAAWQTAAE RQAAAAAAGG AAAAAPPAEL AVGRAERPRD 540 LVFVTAEAAP WSKTGGLGDV MGALPRSLAA RGHRVMVVSP RYLAPSAAKR YEGIKDTGVR 600 ARLNLNPPGA KADGGGGVHE VGFYHLHKDG VDWVFVDHIS YHREGTPYGN AAGTYGDNLF 660 RFSLLCMAAC EAPLLLHVGG HRYGTPPGLP YGQNVTFIAN DWHAGLVPVY VAAKYRRHGV 720 YREARCVLAL HNLAHQGAHP PRTFNSLGLP GEWYGALEWV DTGDNGAGGG GGGGGGPGGG 780 ARRHMQRVPT INIMKAAMVT SDKLVTVSPA YAWEVCDDKG EQGMGLTSLL RQRMGDLQGI 840 VNGIDVGEWD PRTDPYIPRN YHEGSLGGKG LCKAALQGEL GLPVDPAAPL LGFIGRLDFQ 900 KGPDLVLGVL RPLVAAGCQV VLLGSGAADY EEAFKAAQAA FPANVRAHVG FSVPLSHKIL 960 AASDILLMPS RFEPCGLNQM YAMRYGTVPV AHGTGGLRDT IDDVNPFRGE GFSRAGGMMG 1020 ANDADRELEE LFEKGLAWGR PTGGRSADDP STNNQDYYEP FQDYFGSGGR YGAVADGAEE 1080 DDGYGMYDTD DSDSGSGSDS PADSDSPWRR GLQGLQTRRD LGTGWTFAPA SEEALLDAVS 1140 AALQIYERHP DKWRRIQLAG MRRDFSWGRA ARQWESVIET VVAAPTYSK* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 9.0e-13 | 1122 | 1179 | 58 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 5.0e-13 | 1122 | 1177 | 56 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 3.0e-139 | 542 | 1013 | 483 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 1.0e-142 | 542 | 1012 | 472 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-159 | 542 | 1038 | 503 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF24126.1 | 0 | 516 | 1007 | 46 | 500 | AF121673_1 soluble starch synthase [Arabidopsis thaliana] |
| GenBank | AAF24126.1 | 0.003 | 1125 | 1187 | 511 | 573 | AF121673_1 soluble starch synthase [Arabidopsis thaliana] |
| RefSeq | XP_001697048.1 | 0 | 533 | 822 | 1 | 263 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001697048.1 | 8e-27 | 954 | 1012 | 377 | 435 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001697048.1 | 2e-36 | 1117 | 1189 | 438 | 510 | soluble starch synthase [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 540 | 1001 | 11 | 440 | A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus Marinus |
| PDB | 3vue_A | 0 | 540 | 1001 | 11 | 440 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 541 | 1003 | 3 | 407 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 541 | 1045 | 3 | 449 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO595058 | 457 | 556 | 1011 | 0 |
| HO581986 | 356 | 657 | 1011 | 0 |
| HO595058 | 67 | 1122 | 1188 | 0.00000001 |
| HO581986 | 29 | 1160 | 1188 | 0.11 |
| HO581986 | 34 | 1122 | 1154 | 0.11 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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