Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g004879m |
Family | GT5 |
Protein Properties | Length: 726 Molecular Weight: 82837.5 Isoelectric Point: 6.4551 |
Chromosome | Chromosome/Scaffold: 00007 Start: 1381600 End: 1386488 |
Description | starch synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 334 | 675 | 0 |
HVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQ FYGEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAH DRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKP LVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPHI |
Full Sequence |
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Protein Sequence Length: 726 Download |
MRLAETDARI RVAAQEKIHV ELLEDQLQKL QHELTHRGVS EHSELDVFAN QNEPANEDLV 60 LNNSEIHSFS KELDSLKTEN LSLKNDIKVL KAELNSVKDA DERVVMLEME RSSLESSLKE 120 LESKLSISQE DVAKLSTLKV ECKDLYEKVE NLQGLLAKAT KQADQAISVL QQNQELRKKV 180 DKLEESLDEA NIYKLSSEKM QQYNELMQQK MKLLEERLQR SDEEIHSYVQ LYQESVKEFQ 240 DTLHSLKEES KKRAVHEPVD DMPWEFWSRL LLIIDGWLLE KKLSTSEAKL LREMVWKRNG 300 RIRDAYMECK EKNEHEAIST FLKLTSSSIS SGLHVIHIAA EMAPVAKVGG LGDVVAGLGK 360 ALQKKGHLVE IVLPKYDCMQ YDRIDDLRAL DVVVESYFDG RLFKNKVWVS TIEGLPVYFI 420 EPHHPDKFFW RGQFYGEHDD FRRFSFFSRA ALELLLQAGK QPDIIHCHDW QTAFVAPLYW 480 DLYVPKGLNS ARVCFTCHNF EYQGTAPAKE LASCGLDVQQ LNRPDRMQDN SAHDRINPLK 540 GAIVFSNIVT TVSPSYAQEV RTSEGGQGLH STLNFHSKKF VGILNGIDTD AWNPATDTFL 600 KVQYNANDLQ GKAENKESIR KHLGLSSADA RKPLVGCITR LVPQKGVHLI RHAIYRTLEL 660 GGQFILLGSS PVPHIQVYPI LLSSFSFLRK HIFNICNLYI KLGQGGDLTV NNNCEPWLHH 720 IEVWC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK00654 | glgA | 6.0e-109 | 333 | 669 | 339 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 7.0e-115 | 334 | 669 | 338 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 3.0e-117 | 333 | 669 | 342 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 0 | 1 | 677 | 677 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA16796.1 | 0 | 94 | 676 | 303 | 888 | starch synthase-like protein [Arabidopsis thaliana] |
RefSeq | NP_193558.3 | 0 | 94 | 676 | 303 | 885 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002274716.1 | 0 | 34 | 677 | 223 | 858 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298514.1 | 0 | 1 | 676 | 79 | 733 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519725.1 | 0 | 145 | 676 | 312 | 843 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rzv_B | 9e-39 | 333 | 672 | 1 | 331 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 9e-39 | 333 | 672 | 1 | 331 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 9e-39 | 333 | 672 | 1 | 331 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 1rzu_A | 9e-39 | 333 | 672 | 1 | 331 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3d1j_A | 7e-36 | 333 | 672 | 1 | 333 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EL448877 | 316 | 261 | 576 | 0 |
DV124304 | 258 | 397 | 654 | 0 |
CB893818 | 284 | 329 | 612 | 0 |
EG664148 | 262 | 363 | 624 | 0 |
CF828776 | 219 | 458 | 676 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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