Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g006770m |
Family | GT5 |
Protein Properties | Length: 633 Molecular Weight: 70150.8 Isoelectric Point: 5.8376 |
Chromosome | Chromosome/Scaffold: 00015 Start: 1253023 End: 1258736 |
Description | starch synthase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 279 | 620 | 0 |
NVILVAAECGPWSKTGGLGDVAGALPKALARRGHRVMVVAPHYGNYAEPQDTGIRKRYRVDRQDIEVAYFQAYIDGVDFVFLDSPLFRHLGNNIYGGGRE DILKRMVLFCKAAIEIPWYVPCGGVCYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSLLVIHNIAHQGRGPVSDFVYTDLPGHYLDLFKLYDPV GGEHFNIFAAGLKTADRVVTVSRGYSWELKTAEGGWGLHNIINEVDWKLSGIVNGIDTKEWSPMYDIHLTSDGYTNYCLDTLHTGKPQCKAALQREFGLP VRDDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLSHVGH |
Full Sequence |
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Protein Sequence Length: 633 Download |
MASIRSLSFM VETKADSYVV LFSKNQYRPS SSFSAFRPKK SPIFAFLNNS VSGFSFRSNK 60 SGHLLKVKHV KATGAGFVED ESGNEPEDSL QATIEKSKKV LAMQKQLLQQ ISERRKLVSS 120 IKSDIANSEE DEVSYEEREN SFSDLDFTST SSSNVVENQN GIIPSSSGDH STANEAPKLQ 180 SSAANRGPDA GGKESENRLS PEKESIDIDS SKLLKGTDTQ STWSDELPSF LSRTAVISSP 240 KEERHEKDLD QVQQIDSEPI EPKTEEAKPP PLAGANVMNV ILVAAECGPW SKTGGLGDVA 300 GALPKALARR GHRVMVVAPH YGNYAEPQDT GIRKRYRVDR QDIEVAYFQA YIDGVDFVFL 360 DSPLFRHLGN NIYGGGREDI LKRMVLFCKA AIEIPWYVPC GGVCYGDGNL VFIANDWHTA 420 LLPVYLKAYY RDNGLMQYTR SLLVIHNIAH QGRGPVSDFV YTDLPGHYLD LFKLYDPVGG 480 EHFNIFAAGL KTADRVVTVS RGYSWELKTA EGGWGLHNII NEVDWKLSGI VNGIDTKEWS 540 PMYDIHLTSD GYTNYCLDTL HTGKPQCKAA LQREFGLPVR DDVPVIGFIG RLDHQKGVDL 600 IAEAIPWMMG QDVQLSHVGH WQTRFGRDAE EL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam08323 | Glyco_transf_5 | 2.0e-70 | 280 | 522 | 248 | + Starch synthase catalytic domain. | ||
COG0297 | GlgA | 5.0e-77 | 278 | 625 | 358 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 4.0e-94 | 278 | 615 | 348 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-119 | 279 | 615 | 343 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 4.0e-126 | 278 | 615 | 342 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF13168.1 | 0 | 1 | 619 | 1 | 601 | AF173900_1 granule bound starch synthase II precursor [Manihot esculenta] |
GenBank | ABV25894.1 | 0 | 1 | 619 | 1 | 601 | starch synthase isoform II [Manihot esculenta] |
EMBL | CBI22230.1 | 0 | 1 | 615 | 6 | 651 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002278470.1 | 0 | 1 | 619 | 1 | 622 | PREDICTED: similar to starch synthase [Vitis vinifera] |
RefSeq | XP_002324061.1 | 0 | 1 | 619 | 1 | 592 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 278 | 625 | 10 | 369 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3vue_A | 0 | 278 | 625 | 10 | 369 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 1rzv_B | 3e-31 | 278 | 605 | 1 | 313 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 3e-31 | 278 | 605 | 1 | 313 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 3e-31 | 278 | 605 | 1 | 313 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777841 | 397 | 70 | 459 | 0 |
HO777841 | 168 | 452 | 619 | 0 |
DW000910 | 256 | 364 | 619 | 0 |
DY299469 | 321 | 1 | 320 | 0 |
DY299469 | 65 | 267 | 329 | 0.0000006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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