| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.047530.3 |
| Family | GT5 |
| Protein Properties | Length: 887 Molecular Weight: 100806 Isoelectric Point: 4.8663 |
| Chromosome | Chromosome/Scaffold: 00542 Start: 2528870 End: 2534182 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT5 | 390 | 873 | 0 |
| VIHIAAEMAPVAKVGGLGDVITGLSKALQSRGHLVEIVLPKYDCMEYSRIKDLRLLDAVLESYFDGRLFKNKIWVGTVEGLPVYFIEPLHPDKFFWRAQY YGEHDDFRRFSYFSRAALELLTRAGKRPDIIHCHDWQTAFIAPLYWDLYYPKGLNSARICFTCHNFEYQGTAPASDLGSCGLDVDQLNRQDRLQDNSSHE RINAVKGAVVFSNIVTTVSPTYAQEVRRAEGGHGLHSTLNFHSKKFFGILNGIDTEVWNPATDSFIKVQYNANDLQGKAENKDALRRHLGLSSNVRKPLV GCITRLVPQKGIHLIRYAIYRTLELGGQFVLLGSSPVPHIQREFEDIANHFQSHDQIRLVLAYDESLSHWIYAGSDMFIIPSIFEPCGLTQMIAMRYGSI PIVRKTGGLNDSVFDVDDERTPTELQNGYTFLTPDEQGMNSALERAFSHYLNNPSSWKQLVQKVMDVDFSWETSAAQYEELYSK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 887 Download |
| MGLLKFQTGE VDTEGLNKGV QLEDLIGMIK NAEKNILLLN QARVRALEDL EKILSEKEEL 60 QREINGLEMR LAETDTRIEV AAQEKVHVEQ LEDQFEELQK QLNFSSGTEQ SMNGNLNDVP 120 IDSLTKELHL LKSENIDLKN DIQTLKEELS NVKNSDQHLA FLEEERSVLE SSLKDLESKL 180 STSQEDGSKL SVLNAECMDL RNRVEHLQVL LDKATEQADQ AIRVLQQNQE LQEKVEKLEE 240 SLEEANAFKL SSEKLQQDNE LMQQKIGLLE DRLQSSDEEL QSYIKLYQES VKDFQDTLDT 300 IKEANKKTAI DEPVNDMPLE FWSRLLLLID GWLLEEKISG DDAKLLKEMA WKRDARIYDA 360 YMACKEKNEL EAVALFLNLT SSPKRSGLYV IHIAAEMAPV AKVGGLGDVI TGLSKALQSR 420 GHLVEIVLPK YDCMEYSRIK DLRLLDAVLE SYFDGRLFKN KIWVGTVEGL PVYFIEPLHP 480 DKFFWRAQYY GEHDDFRRFS YFSRAALELL TRAGKRPDII HCHDWQTAFI APLYWDLYYP 540 KGLNSARICF TCHNFEYQGT APASDLGSCG LDVDQLNRQD RLQDNSSHER INAVKGAVVF 600 SNIVTTVSPT YAQEVRRAEG GHGLHSTLNF HSKKFFGILN GIDTEVWNPA TDSFIKVQYN 660 ANDLQGKAEN KDALRRHLGL SSNVRKPLVG CITRLVPQKG IHLIRYAIYR TLELGGQFVL 720 LGSSPVPHIQ REFEDIANHF QSHDQIRLVL AYDESLSHWI YAGSDMFIIP SIFEPCGLTQ 780 MIAMRYGSIP IVRKTGGLND SVFDVDDERT PTELQNGYTF LTPDEQGMNS ALERAFSHYL 840 NNPSSWKQLV QKVMDVDFSW ETSAAQYEEL YSKSVARAKA AAAGRT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 8.0e-159 | 384 | 871 | 495 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 0 | 7 | 875 | 870 | + transferase, transferring glycosyl groups | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 390 | 873 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 388 | 874 | 491 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 0 | 388 | 873 | 488 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA16796.1 | 0 | 21 | 881 | 184 | 1067 | starch synthase-like protein [Arabidopsis thaliana] |
| EMBL | CAB40375.1 | 0 | 28 | 880 | 1 | 870 | starch synthase, isoform V [Vigna unguiculata] |
| RefSeq | NP_193558.3 | 0 | 21 | 880 | 184 | 1035 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 21 | 882 | 142 | 1009 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 20 | 882 | 30 | 885 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 390 | 873 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 390 | 873 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 390 | 873 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 390 | 873 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 390 | 873 | 3 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| GO851132 | 333 | 463 | 794 | 0 |
| CF828776 | 290 | 509 | 797 | 0 |
| GW865616 | 298 | 494 | 790 | 0 |
| CB893818 | 281 | 387 | 667 | 0 |
| EL448877 | 316 | 316 | 631 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
