| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre04.g215150.t1.2 |
| Family | GT5 |
| Protein Properties | Length: 588 Molecular Weight: 63723.7 Isoelectric Point: 7.12 |
| Chromosome | Chromosome/Scaffold: 4 Start: 1242667 End: 1252344 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 90 | 575 | 0 |
| NIMFVTSEVAPWSKTGGLADVLGSLPFALAERGHRVMVVSPRWVLLGRFRYSLLTLAAMEAPFFLELPVPPQQQDPPRSPTALAAAEAAAAAAAKAANGS GPTAAAIAEIEAVVQAESSVPKTKYGQDIMFVANDWHTSLIPVYLAAKYRPHGVYGNARAILAIHNLRHQGVFPPYTYESLGLPPHWYGCLEWQYPPHQR QGSWAEEGRSVNHLKAGLTTADRVVTVSAGYAEEIKTYLGGWGMEGIIAARDPVLNGIVNGIDTDEWNPSIDPHLPATYDATNFVEGKAKCKMELQRELG LPVNEHIPLVAFIGRLDPQKGADILLEAAPALLRHNNVQLVCLGSGNKDLEDGLRWLEAEFKDRARGWVGFNVPFSHKLTAAADILLMPSRFEPCGLNQL YAMRYGAVPVAHKTGGLRDTVLDFNPWAQEGTGWTYTSCDAQGLLHAVGVALLTYNNHKEDFRKLQLRGMAREASWDGAAQQYEQI | |||
| Full Sequence |
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| Protein Sequence Length: 588 Download |
| MLLQSGRPVP SAQARALRRA AVQSARPCRV IPGGRSAVRA DAAAAIASPA VAVEEALPGI 60 ETTHDKNVHG TAGSVVVEQP GLKRASTLRN IMFVTSEVAP WSKTGGLADV LGSLPFALAE 120 RGHRVMVVSP RWVLLGRFRY SLLTLAAMEA PFFLELPVPP QQQDPPRSPT ALAAAEAAAA 180 AAAKAANGSG PTAAAIAEIE AVVQAESSVP KTKYGQDIMF VANDWHTSLI PVYLAAKYRP 240 HGVYGNARAI LAIHNLRHQG VFPPYTYESL GLPPHWYGCL EWQYPPHQRQ GSWAEEGRSV 300 NHLKAGLTTA DRVVTVSAGY AEEIKTYLGG WGMEGIIAAR DPVLNGIVNG IDTDEWNPSI 360 DPHLPATYDA TNFVEGKAKC KMELQRELGL PVNEHIPLVA FIGRLDPQKG ADILLEAAPA 420 LLRHNNVQLV CLGSGNKDLE DGLRWLEAEF KDRARGWVGF NVPFSHKLTA AADILLMPSR 480 FEPCGLNQLY AMRYGAVPVA HKTGGLRDTV LDFNPWAQEG TGWTYTSCDA QGLLHAVGVA 540 LLTYNNHKED FRKLQLRGMA REASWDGAAQ QYEQIIDWAF MDPPYCR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK00654 | glgA | 9.0e-12 | 90 | 130 | 41 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-16 | 90 | 131 | 42 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 1.0e-146 | 222 | 575 | 356 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-157 | 217 | 575 | 359 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 4.0e-167 | 90 | 575 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAX51357.1 | 0 | 85 | 585 | 3 | 513 | soluble starch synthase [Hordeum vulgare subsp. vulgare] |
| RefSeq | NP_001056881.1 | 0 | 53 | 585 | 94 | 639 | Os06g0160700 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | P93568 | 0 | 90 | 587 | 132 | 641 | SSY1_SOLTU RecName: Full=Soluble starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Soluble starch synthase I; Short=SS I; Flags: Precursor |
| RefSeq | XP_001698697.1 | 0 | 1 | 587 | 1 | 579 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001784416.1 | 0 | 83 | 585 | 12 | 525 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 211 | 512 | 148 | 442 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vuf_A | 0.00002 | 90 | 132 | 11 | 53 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 211 | 512 | 148 | 442 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3vue_A | 0.00002 | 90 | 132 | 11 | 53 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 90 | 575 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO595058 | 376 | 214 | 585 | 0 |
| GO872237 | 349 | 239 | 584 | 0 |
| HO581986 | 343 | 214 | 548 | 0 |
| HO595058 | 28 | 106 | 133 | 0.000001 |
| HO595058 | 16 | 90 | 105 | 0.000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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